RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA429937" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA429937 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6190327 6190327 PRJNA429937_P_NODE_108385_length_278_cov_16740.642570_g85764_i0 PRJNA429937 108385 278 16740.64257 46538.9863446 Spizellomyces 4815 Fungi Fungi 407 4.74e-109   NTclustered gi|311235603|ref|NG_027618.1| 109760 g85764 i0 94.074 81.1187050359712 270 12 96 3 1 268 2500 2767 Spizellomyces punctatus ATCC 48900 28S rRNA gene, partial sequence; from TYPE material blastn 22551 407 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
10629445 10629445 PRJNA429937_P_NODE_106869_length_282_cov_16392.774704_g84249_i0 PRJNA429937 106869 282 16392.774704 46227.62466528 Entophlyctis sp. JEL174 281838 Fungi Fungi 220 6.74e-53   NTclustered gi|82398256|gb|DQ273782.1| 281838 g84249 i0 97.674 53.0460992907801 129 2 59 1 145 273 2504 2631 Entophlyctis sp. JEL174 isolate AFTOL-ID 38 28S ribosomal RNA gene, partial sequence blastn 14959 220 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis sp. JEL174
18277210 18277210 PRJNA429937_P_NODE_106855_length_283_cov_1.543307_g84235_i0 PRJNA429937 106855 283 1.543307 4.36755881 uncultured Chytridiomycota 175247 Fungi Fungi 95.3 4.28e-15   NTclustered gi|1016883636|gb|KU898750.1| 175247 g84235 i0 82.301 39.2332155477032 113 17 39 3 14 124 767 878 Uncultured Chytridiomycota clone Billefjorden8_BTH 28S ribosomal RNA gene, partial sequence blastn 11103 95.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota         uncultured Chytridiomycota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;