RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA429937" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA429937 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4254121 4254121 PRJNA429937_P_NODE_65184_length_423_cov_3.271574_g26173_i1 PRJNA429937 65184 423 3.271574 13.83875802 Acidianus brierleyi 41673 Archaea Archaea 52.8 0.041   NTclustered gi|1820310180|gb|CP029289.2| 41673 g26173 i1 100 0.066193853427896 28 0 7 0 395 422 833643 833670 Acidianus brierleyi strain DSM 1651 chromosome, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Acidianus Acidianus brierleyi
5530179 5530179 PRJNA429937_P_NODE_31305_length_650_cov_2.834138_g19109_i0 PRJNA429937 31305 650 2.834138 18.421897 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 1053 0   NTclustered gi|937513727|gb|CP012850.1| 1353260 g19109 i0 99.314 0.987692307692308 583 2 98 2 1 581 2820740 2820158 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 642 1053 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
9354629 9354629 PRJNA429937_P_NODE_31308_length_650_cov_2.732689_g19109_i1 PRJNA429937 31308 650 2.732689 17.7624785 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 1053 0   NTclustered gi|937513727|gb|CP012850.1| 1353260 g19109 i1 99.314 0.987692307692308 583 2 98 2 1 581 2820740 2820158 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 642 1053 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;