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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA429937" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 20 ✖

bioproject 1

  • PRJNA429937 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1087370 1087370 PRJNA429937_P_NODE_150461_length_180_cov_3.066225_g127834_i0 PRJNA429937 150461 180 3.066225 5.519205 Vermamoeba 1260114 Tubulinea other_Eukaryota 222 1.0999999999999999e-53   NTclustered gi|300078496|gb|GU001158.1| 5778 g127834 i0 97.692 44.7222222222222 130 1 72 2 51 180 2647 2774 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 8050 222 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
2362717 2362717 PRJNA429937_P_NODE_111342_length_271_cov_1.681818_g88720_i0 PRJNA429937 111342 271 1.681818 4.55772678 Physaraceae 1115744 Evosea other_Eukaryota 141 5.16e-29   NTclustered gi|475222|emb|X78959.1| 35220 g88720 i0 90.09 22.3763837638376 111 8 40 3 164 271 232 342 P.flavicomum (UFF6) large subunit rRNA gene blastn 6064 141 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum flavicomum
2976528 2976528 PRJNA429937_P_NODE_129843_length_225_cov_3.341837_g107216_i0 PRJNA429937 129843 225 3.341837 7.51913325 Entamoeba invadens 33085 Evosea other_Eukaryota 52.8 0.02   NTclustered gi|471207746|ref|XM_004260429.1| 370355 g107216 i0 100 0.124444444444444 28 0 12 0 144 171 433 406 Entamoeba invadens IP1 hypothetical protein (EIN_432580) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
2977348 2977348 PRJNA429937_P_NODE_40203_length_568_cov_4.306122_g18391_i1 PRJNA429937 40203 568 4.306122 24.45877296 Didymium iridis 5793 Evosea other_Eukaryota 263 2.38e-65   NTclustered gi|2687|emb|X60210.1| 5793 g18391 i1 79.021 23.0228873239437 429 56 72 22 101 509 2675 2261 D.iridis LSU rRNA gene blastn 13077 263 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
5531362 5531362 PRJNA429937_P_NODE_95345_length_316_cov_2.783972_g72749_i0 PRJNA429937 95345 316 2.783972 8.79735152 Entamoeba invadens 33085 Evosea other_Eukaryota 52.8 0.03   NTclustered gi|471207746|ref|XM_004260429.1| 370355 g72749 i0 100 0.0886075949367089 28 0 9 0 27 54 406 433 Entamoeba invadens IP1 hypothetical protein (EIN_432580) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
6803765 6803765 PRJNA429937_P_NODE_153046_length_170_cov_5.035461_g130419_i0 PRJNA429937 153046 170 5.035461 8.5602837 Malpighamoeba mellificae 2901445 Tubulinea other_Eukaryota 100 5.01e-17   NTclustered gi|2161397193|gb|OL757386.1| 2901445 g130419 i0 100 31.2705882352941 54 0 32 0 1 54 1320 1373 Malpighamoeba mellificae isolate BK205-17_NGS small subunit ribosomal RNA gene, partial sequence blastn 5316 100 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Malpighamoeba Malpighamoeba mellificae
8080692 8080692 PRJNA429937_P_NODE_76347_length_379_cov_1.728571_g54170_i0 PRJNA429937 76347 379 1.728571 6.55128409 Paramoeba branchiphila 308475 Discosea other_Eukaryota 135 3.4900000000000006e-27   NTclustered gi|226347442|gb|FJ807261.1| 308475 g54170 i0 87.826 24.1398416886544 115 14 57 0 1 115 253 367 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 9149 135 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
9354140 9354140 PRJNA429937_P_NODE_152228_length_173_cov_4.388889_g129601_i0 PRJNA429937 152228 173 4.388889 7.59277797 Didymium environmental sample 1173723 Evosea other_Eukaryota 235 1.34e-57   NTclustered gi|407196931|gb|JX545305.1| 1173723 g129601 i0 91.329 2.84393063583815 173 14 100 1 1 173 181 10 Didymium environmental sample clone HCA_D08-36 28S ribosomal RNA gene, partial sequence blastn 492 235 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae   Didymium environmental sample
10629548 10629548 PRJNA429937_P_NODE_113729_length_264_cov_556.863830_g91106_i0 PRJNA429937 113729 264 556.86383 1470.1205112 Vermamoeba sp. 1972851 Tubulinea other_Eukaryota 381 2.709999999999999e-101   NTclustered gi|2651357782|gb|PP174298.1| 1972851 g91106 i0 93.385 33.375 257 17 97 0 8 264 3962 4218 Vermamoeba sp. isolate 22 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8811 381 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba sp.
10629594 10629594 PRJNA429937_P_NODE_117709_length_254_cov_2.982222_g95083_i0 PRJNA429937 117709 254 2.982222 7.57484388 Entamoeba invadens 33085 Evosea other_Eukaryota 52.8 0.023   NTclustered gi|471207746|ref|XM_004260429.1| 370355 g95083 i0 100 0.110236220472441 28 0 11 0 201 228 433 406 Entamoeba invadens IP1 hypothetical protein (EIN_432580) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
10630090 10630090 PRJNA429937_P_NODE_20769_length_807_cov_181.088689_g11328_i1 PRJNA429937 20769 807 181.088689 1461.38572023 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 628 2.9399999999999995e-175   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g11328 i1 97.067 41.8128872366791 375 8 59 3 7 380 4736 4364 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 33743 628 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
10631292 10631292 PRJNA429937_P_NODE_79869_length_366_cov_4.474777_g57490_i0 PRJNA429937 79869 366 4.474777 16.37768382 Physarum pusillum 385468 Evosea other_Eukaryota 431 3.82e-116   NTclustered gi|1543031419|gb|MK336174.1| 385468 g57490 i0 94.326 77.6311475409836 282 14 88 2 24 304 1622 1902 Physarum pusillum voucher RC14091001 small subunit ribosomal RNA gene, partial sequence blastn 28413 431 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum pusillum
14454438 14454438 PRJNA429937_P_NODE_104172_length_290_cov_3.045977_g81555_i0 PRJNA429937 104172 290 3.045977 8.8333333 Didymium environmental sample 1173723 Evosea other_Eukaryota 202 2.52e-47   NTclustered gi|407196931|gb|JX545305.1| 1173723 g81555 i0 91.275 1.75172413793103 149 12 51 1 142 290 157 10 Didymium environmental sample clone HCA_D08-36 28S ribosomal RNA gene, partial sequence blastn 508 202 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae   Didymium environmental sample
14454628 14454628 PRJNA429937_P_NODE_117712_length_254_cov_2.964444_g95086_i0 PRJNA429937 117712 254 2.964444 7.52968776 Didymium environmental sample 1173723 Evosea other_Eukaryota 202 2.1599999999999998e-47   NTclustered gi|407196931|gb|JX545305.1| 1173723 g95086 i0 91.275 3.81496062992126 149 12 83 1 1 149 10 157 Didymium environmental sample clone HCA_D08-36 28S ribosomal RNA gene, partial sequence blastn 969 202 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae   Didymium environmental sample
18277540 18277540 PRJNA429937_P_NODE_138275_length_208_cov_3.994413_g115648_i0 PRJNA429937 138275 208 3.994413 8.30837904 Didymium environmental sample 1173723 Evosea other_Eukaryota 204 4.75e-48   NTclustered gi|407196931|gb|JX545305.1| 1173723 g115648 i0 90.85 4.3125 153 12 99 2 1 152 10 161 Didymium environmental sample clone HCA_D08-36 28S ribosomal RNA gene, partial sequence blastn 897 204 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae   Didymium environmental sample
22102073 22102073 PRJNA429937_P_NODE_103158_length_293_cov_2.996212_g80543_i0 PRJNA429937 103158 293 2.996212 8.77890116 Entamoeba invadens 33085 Evosea other_Eukaryota 52.8 0.027   NTclustered gi|471207746|ref|XM_004260429.1| 370355 g80543 i0 100 0.0955631399317406 28 0 10 0 144 171 433 406 Entamoeba invadens IP1 hypothetical protein (EIN_432580) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
22102088 22102088 PRJNA429937_P_NODE_104258_length_290_cov_2.402299_g81641_i0 PRJNA429937 104258 290 2.402299 6.9666671 Didymium environmental sample 1173723 Evosea other_Eukaryota 202 2.52e-47   NTclustered gi|407196931|gb|JX545305.1| 1173723 g81641 i0 91.275 1.53103448275862 149 12 51 1 1 149 10 157 Didymium environmental sample clone HCA_D08-36 28S ribosomal RNA gene, partial sequence blastn 444 202 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae   Didymium environmental sample
22102728 22102728 PRJNA429937_P_NODE_19178_length_839_cov_175.814815_g11328_i0 PRJNA429937 19178 839 175.814815 1475.08629785 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 1358 0   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g11328 i0 97.044 29.7449344457688 812 15 97 8 7 817 4736 3933 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24956 1358 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
24651832 24651832 PRJNA429937_P_NODE_102860_length_294_cov_2.724528_g80246_i0 PRJNA429937 102860 294 2.724528 8.01011232 Entamoeba invadens 33085 Evosea other_Eukaryota 52.8 0.027   NTclustered gi|471207746|ref|XM_004260429.1| 370355 g80246 i0 100 0.0952380952380952 28 0 10 0 241 268 433 406 Entamoeba invadens IP1 hypothetical protein (EIN_432580) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
24652738 24652738 PRJNA429937_P_NODE_30260_length_662_cov_3.913112_g18391_i0 PRJNA429937 30260 662 3.913112 25.90480144 Didymium iridis 5793 Evosea other_Eukaryota 263 2.8e-65   NTclustered gi|2687|emb|X60210.1| 5793 g18391 i0 79.021 20.0528700906344 429 56 62 22 60 468 2261 2675 D.iridis LSU rRNA gene blastn 13275 263 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;