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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA421571" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA421571 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1698771 1698771 PRJNA421571_P_NODE_74662_length_290_cov_1.414747_g72113_i0 PRJNA421571 74662 290 1.414747 4.1027663 Halorubrum ruber 2982524 Archaea Archaea 110 1.5700000000000001e-19   NTclustered gi|2031421124|gb|CP073695.1| 2982524 g72113 i0 83.333 4.0551724137931 126 14 42 7 165 286 2452235 2452357 Halorubrum ruber strain MBLA0099 chromosome, complete genome blastn 1176 110 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum ruber
2972638 2972638 PRJNA421571_P_NODE_108383_length_201_cov_4.812500_g105834_i0 PRJNA421571 108383 201 4.8125 9.673125 Haloplanus halophilus 2949993 Archaea Archaea 52.8 0.017   NTclustered gi|2252468249|gb|CP098514.1| 2949993 g105834 i0 100 0.139303482587065 28 0 14 0 160 187 1816079 1816106 Haloplanus sp. GDY1 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus halophilus
6189374 6189374 PRJNA421571_P_NODE_97265_length_247_cov_1.770115_g94716_i0 PRJNA421571 97265 247 1.770115 4.37218405 Nitrososphaera 497726 Archaea Archaea 335 1.9799999999999992e-87   NTclustered gi|388254672|gb|JQ768092.1| 115547 g94716 i0 91.093 19.4615384615385 247 22 100 0 1 247 29290 29536 Uncultured archaeon clone 02j05, complete sequence blastn 4807 335 1 Archaea               uncultured archaeon
13176741 13176741 PRJNA421571_P_NODE_41971_length_448_cov_2.493333_g39423_i0 PRJNA421571 41971 448 2.493333 11.17013184 Candidatus Caldarchaeum subterraneum 311458 Archaea Archaea 52.8 0.043   NTclustered gi|315425986|dbj|AP011843.1| 311458 g39423 i0 100 0.0625 28 0 6 0 45 72 28651 28678 Candidatus Caldiarchaeum subterraneum DNA, partial sequence, fosmid clone: JFF032_D08 blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum subterraneum
18936839 18936839 PRJNA421571_P_NODE_15535_length_940_cov_1.662053_g13571_i0 PRJNA421571 15535 940 1.662053 15.6232982 Halobacteriales 2235 Archaea Archaea 54.7 0.026   NTclustered gi|1526250537|gb|CP034145.1| 660522 g13571 i0 100 0.0617021276595745 29 0 3 0 488 516 1363964 1363992 Haloplanus aerogenes strain JCM 16430 chromosome, complete genome blastn 58 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus aerogenes
20212335 20212335 PRJNA421571_P_NODE_72416_length_296_cov_1.515695_g69867_i0 PRJNA421571 72416 296 1.515695 4.4864572 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 508 1.36e-139   NTclustered gi|937513727|gb|CP012850.1| 1353260 g69867 i0 97.635 73.972972972973 296 7 100 0 1 296 848990 848695 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 21896 508 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
23374007 23374007 PRJNA421571_P_NODE_102919_length_243_cov_1.694118_g100370_i0 PRJNA421571 102919 243 1.694118 4.11670674 Thermococcus barossii 54077 Archaea Archaea 54.7 0.006   NTclustered gi|1214547877|gb|CP015101.1| 54077 g100370 i0 100 0.119341563786008 29 0 12 0 212 240 1149745 1149773 Thermococcus barossii strain SHCK-94 chromosome, complete genome blastn 29 54.7 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus barossii
25312434 25312434 PRJNA421571_P_NODE_98660_length_246_cov_1.780347_g96111_i0 PRJNA421571 98660 246 1.780347 4.37965362 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 344 3.27e-90   NTclustered gi|388254672|gb|JQ768092.1| 115547 g96111 i0 91.87 18.1260162601626 246 20 100 0 1 246 27469 27224 Uncultured archaeon clone 02j05, complete sequence blastn 4459 346 0.994219653179191 Archaea               uncultured archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;