RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA421571" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA421571 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16999191 16999191 PRJNA421571_P_NODE_100574_length_245_cov_0.895349_g98025_i0 PRJNA421571 100574 245 0.895349 2.19360505 Linderina pennispora 61395 Fungi Fungi 167 7.57e-37   NTclustered gi|2028320666|ref|XM_040889247.1| 61395 g98025 i0 82.09 0.820408163265306 201 31 81 4 47 244 483 285 Linderina pennispora 60S ribosomal protein L11 (DL89DRAFT_274988), partial mRNA blastn 201 167 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
17001312 17001312 PRJNA421571_P_NODE_75854_length_287_cov_1.439252_g73305_i0 PRJNA421571 75854 287 1.439252 4.13065324 Zancudomyces culisetae 1213189 Fungi Fungi 119 2.58e-22   NTclustered gi|311235631|ref|NG_027648.1| 1213189 g73305 i0 85.124 105.682926829268 121 12 42 4 1 120 2809 2924 Zancudomyces culisetae ATCC 16244 28S rRNA gene, partial sequence; from TYPE material blastn 30331 119 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Zancudomyces Zancudomyces culisetae
19548297 19548297 PRJNA421571_P_NODE_24456_length_692_cov_2.617124_g22007_i0 PRJNA421571 24456 692 2.617124 18.11049808 Linderina pennispora 61395 Fungi Fungi 374 1.3e-98   NTclustered gi|2028323302|ref|XM_040891225.1| 61395 g22007 i0 79.19 33.2456647398844 543 109 78 4 150 690 1032 492 Linderina pennispora WD40 repeat-like protein (DL89DRAFT_32066), mRNA blastn 23006 374 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
22100925 22100925 PRJNA421571_P_NODE_92678_length_251_cov_0.865169_g90129_i0 PRJNA421571 92678 251 0.865169 2.17157419 Linderina pennispora 61395 Fungi Fungi 213 9.86e-51   NTclustered gi|2028324920|ref|XM_040888337.1| 61395 g90129 i0 83.128 60.1195219123506 243 31 95 10 1 238 283 46 Linderina pennispora uncharacterized protein (DL89DRAFT_269536), partial mRNA blastn 15090 215 0.990697674418605 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;