RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA421571" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA421571 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13176163 13176163 PRJNA421571_P_NODE_24031_length_700_cov_5.894737_g21594_i0 PRJNA421571 24031 700 5.894737 41.263159 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 95.3 1.15e-14   NTclustered gi|1270119057|gb|MG264531.1| 2049346 g21594 i0 88.75 12.4685714285714 80 5 11 4 622 700 146 222 Blattamonas nauphoetae strain Z61EP small subunit ribosomal RNA gene, partial sequence blastn 8728 95.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
19548920 19548920 PRJNA421571_P_NODE_43756_length_433_cov_1.902778_g41208_i0 PRJNA421571 43756 433 1.902778 8.23902874 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.012   NTclustered gi|2794974642|ref|XM_067873730.1| 2049356 g41208 i0 100 0.131639722863741 29 0 7 0 369 397 2177 2205 Monocercomonoides exilis Tre-2/Bub2/Cdc16 (TBC) C family protein (MONOS_3713), mRNA blastn 57 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;