RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA421571" and tax_phylum = "Gastrotricha"

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tax_superkingdom 1

tax_phylum 1

  • Gastrotricha · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA421571 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2972757 2972757 PRJNA421571_P_NODE_14003_length_1000_cov_3.806904_g12161_i0 PRJNA421571 14003 1000 3.806904 38.06904 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 1461 0   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g12161 i0 93.049 12.611 1007 58 100 11 1 1000 9411 8410 Lepidodermella squamata mitochondrion, complete genome blastn 12611 1461 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;