RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA421571" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA421571 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
423654 423654 PRJNA421571_P_NODE_64141_length_324_cov_1.167331_g61592_i0 PRJNA421571 64141 324 1.167331 3.78215244 Asterias rubens 7604 Echinodermata other_Eukaryota 121 8.229999999999999e-23   NTclustered gi|1834267010|ref|XM_033772568.1| 7604 g61592 i0 88.119 3.0679012345679 101 12 31 0 86 186 402 502 PREDICTED: Asterias rubens dynein light chain LC6, flagellar outer arm (LOC117290977), mRNA blastn 994 121 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
5527602 5527602 PRJNA421571_P_NODE_74845_length_289_cov_2.893519_g72296_i0 PRJNA421571 74845 289 2.893519 8.36226991 Diadema antillarum 105358 Echinodermata other_Eukaryota 58.4 5.75e-4   NTclustered gi|2919467476|ref|XM_071643602.1| 105358 g72296 i0 97.143 0.411764705882353 35 0 12 1 132 165 3809 3843 PREDICTED: Diadema antillarum prostaglandin reductase 2-like (LOC139732756), mRNA blastn 119 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
18274735 18274735 PRJNA421571_P_NODE_44535_length_427_cov_2.231638_g41987_i0 PRJNA421571 44535 427 2.231638 9.52909426 Lytechinus pictus 7653 Echinodermata other_Eukaryota 54.7 0.011   NTclustered gi|2707361744|ref|XM_054910354.2| 7653 g41987 i0 100 0.0679156908665105 29 0 7 0 304 332 506 478 PREDICTED: Lytechinus pictus histone-lysine N-methyltransferase NSD2-like (LOC129273332), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;