RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA421571" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA421571 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1086259 1086259 PRJNA421571_P_NODE_92221_length_251_cov_0.865169_g89672_i0 PRJNA421571 92221 251 0.865169 2.17157419 Metazoa 33208 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940740|emb|OZ237567.1| 6108 g89672 i0 100 0.47808764940239 30 0 12 0 10 39 5727897 5727868 Anemonia sulcata genome assembly, chromosome: 13 blastn 120 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
1699130 1699130 PRJNA421571_P_NODE_88662_length_257_cov_1.673913_g86113_i0 PRJNA421571 88662 257 1.673913 4.30195641 Pocillopora verrucosa 203993 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|2751551215|ref|XM_059101251.2| 203993 g86113 i0 100 0.330739299610895 29 0 11 0 198 226 1547 1575 PREDICTED: Pocillopora verrucosa sialin (LOC131784448), mRNA blastn 85 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora verrucosa
2972472 2972472 PRJNA421571_P_NODE_100983_length_245_cov_0.895349_g98434_i0 PRJNA421571 100983 245 0.895349 2.19360505 Eunicella cavolini 317547 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|2918369538|emb|OZ237720.1| 317547 g98434 i0 100 0.114285714285714 28 0 11 0 3 30 46492025 46491998 Eunicella cavolini genome assembly, chromosome: 4 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
5527898 5527898 PRJNA421571_P_NODE_86305_length_262_cov_2.031746_g83756_i0 PRJNA421571 86305 262 2.031746 5.32317452 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 113 1.08e-20   NTclustered gi|2518956760|ref|XR_008978244.1| 13093 g83756 i0 85.849 40.4580152671756 106 15 40 0 153 258 3352 3247 PREDICTED: Hydractinia symbiolongicarpus large subunit ribosomal RNA (LOC130617162), rRNA blastn 10600 113 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
9352074 9352074 PRJNA421571_P_NODE_78128_length_281_cov_2.322115_g75579_i0 PRJNA421571 78128 281 2.322115 6.52514315 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.026   NTclustered gi|2917940714|emb|OZ237561.1| 6108 g75579 i0 100 0.099644128113879 28 0 10 0 254 281 10507536 10507563 Anemonia sulcata genome assembly, chromosome: 7 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
13177106 13177106 PRJNA421571_P_NODE_54511_length_365_cov_0.914384_g51962_i0 PRJNA421571 54511 365 0.914384 3.3375016 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 180 1.52e-40   NTclustered gi|2782881614|ref|XM_067063607.1| 252671 g51962 i0 80.408 23.5260273972603 245 40 66 5 36 276 428 188 PREDICTED: Clytia hemisphaerica large ribosomal subunit protein uL4B-like (LOC136807038), mRNA blastn 8587 180 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
22099466 22099466 PRJNA421571_P_NODE_40758_length_459_cov_4.880829_g38210_i0 PRJNA421571 40758 459 4.880829 22.40300511 Hydra vulgaris 6087 Cnidaria other_Eukaryota 62.1 7.4e-5   NTclustered gi|2744898063|ref|XM_065814701.1| 6087 g38210 i0 97.222 0.0784313725490196 36 1 8 0 46 81 1026 1061 PREDICTED: Hydra vulgaris arginine--tRNA ligase, cytoplasmic (LOC100214624), mRNA blastn 36 62.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;