RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA421571" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA421571 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6802147 6802147 PRJNA421571_P_NODE_93926_length_250_cov_0.870056_g91377_i0 PRJNA421571 93926 250 0.870056 2.17514 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 108 4.76e-19   NTclustered gi|2621702714|emb|OY759598.1| 2026734 g91377 i0 86.598 22.012 97 13 39 0 6 102 2944742 2944646 MAG: Dehalococcoidia bacterium isolate 9e3974e8-1b76-4a2a-ace1-a6b9f67a3735 genome assembly, chromosome: 1 blastn 5503 108 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
15725828 15725828 PRJNA421571_P_NODE_47313_length_408_cov_0.919403_g44765_i0 PRJNA421571 47313 408 0.919403 3.75116424 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 279 1.65e-70   NTclustered gi|2874253741|emb|OY969584.1| 1672391 g44765 i0 79.327 55.2990196078431 416 72 100 11 1 408 1350495 1350086 MAG: uncultured Chloroflexia bacterium isolate MFD01299.bin.c.4 genome assembly, chromosome: 1 blastn 22562 279 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;