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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJNA421571" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 27 ✖

bioproject 1

  • PRJNA421571 · 27 ✖

analysis 1

  • blastn · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
422296 422296 PRJNA421571_P_NODE_20041_length_796_cov_1.410788_g17768_i0 PRJNA421571 20041 796 1.410788 11.22987248 Monoraphidium neglectum 145388 Plants Plants 56.5 0.006   NTclustered gi|926799010|ref|XM_014051475.1| 145388 g17768 i0 100 0.0376884422110553 30 0 4 0 586 615 400 371 Monoraphidium neglectum glutathione reductase (NADPH) mRNA blastn 30 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
422695 422695 PRJNA421571_P_NODE_31461_length_567_cov_5.002024_g28931_i0 PRJNA421571 31461 567 5.002024 28.36147608 Monoraphidium neglectum 145388 Plants Plants 278 8.47e-70   NTclustered gi|926795717|ref|XM_014050538.1| 145388 g28931 i0 83.333 49.2857142857143 300 50 53 0 190 489 360 61 Monoraphidium neglectum 40S ribosomal protein S20-1 mRNA blastn 27945 278 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
4251083 4251083 PRJNA421571_P_NODE_79984_length_277_cov_1.392157_g77435_i0 PRJNA421571 79984 277 1.392157 3.85627489 Chlamydomonas incerta 51695 Plants Plants 265 3.0099999999999997e-66   NTclustered gi|74272606|gb|DQ122868.1| 51695 g77435 i0 84.249 95.2310469314079 273 41 98 2 1 272 109 380 Chlamydomonas incerta 40S ribosomal protein S3 mRNA, complete cds blastn 26379 265 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
5527258 5527258 PRJNA421571_P_NODE_61945_length_332_cov_1.189189_g59396_i0 PRJNA421571 61945 332 1.189189 3.94810748 Chlamydomonas reinhardtii 3055 Plants Plants 209 1.75e-49   NTclustered gi|18122|emb|X61624.1| 3055 g59396 i0 80.435 51.5060240963855 276 52 83 2 58 332 1720 1446 Chlamydomonas reinhardtii atp2 (atpB) mRNA blastn 17100 209 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
6802114 6802114 PRJNA421571_P_NODE_92386_length_251_cov_0.865169_g89837_i0 PRJNA421571 92386 251 0.865169 2.17157419 Chlamydomonas reinhardtii 3055 Plants Plants 159 1.3e-34   NTclustered gi|2082246492|ref|XM_043062586.1| 3055 g89837 i0 85.621 2.54183266932271 153 20 61 2 72 223 167 318 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g250200v5), mRNA blastn 638 159 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
6802120 6802120 PRJNA421571_P_NODE_92686_length_251_cov_0.865169_g90137_i0 PRJNA421571 92686 251 0.865169 2.17157419 Chlorella variabilis 554065 Plants Plants 156 1.69e-33   NTclustered gi|552848028|ref|XM_005851944.1| 554065 g90137 i0 79.817 3.9402390438247 218 40 86 4 36 251 1083 1298 Chlorella variabilis hypothetical protein (CHLNCDRAFT_56437) mRNA, complete cds blastn 989 156 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
8075911 8075911 PRJNA421571_P_NODE_29187_length_602_cov_2.984877_g26670_i0 PRJNA421571 29187 602 2.984877 17.96895954 Monoraphidium neglectum 145388 Plants Plants 255 4.23e-63   NTclustered gi|926778303|ref|XM_014042172.1| 145388 g26670 i0 78.019 51.0066445182724 414 85 68 5 142 552 435 25 Monoraphidium neglectum 40S ribosomal protein S18 mRNA blastn 30706 255 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
9352261 9352261 PRJNA421571_P_NODE_85428_length_264_cov_1.780105_g82879_i0 PRJNA421571 85428 264 1.780105 4.6994772 Chlorella variabilis 554065 Plants Plants 152 2.31e-32   NTclustered gi|552831079|ref|XM_005847987.1| 554065 g82879 i0 82.659 74.8371212121212 173 28 65 2 93 264 974 803 Chlorella variabilis S-adenosyl-L-methionine synthetase (CHLNCDRAFT_145246) mRNA, complete cds blastn 19757 152 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
9352283 9352283 PRJNA421571_P_NODE_86268_length_262_cov_2.291005_g83719_i0 PRJNA421571 86268 262 2.291005 6.0024331 Prototheca bovis 2509265 Plants Plants 274 4.689999999999998e-69   NTclustered gi|1159431146|gb|KX389286.1| 2509265 g83719 i0 87.19 137.209923664122 242 29 92 2 22 262 68 308 Prototheca bovis isolate SAG-2021 alpha tubulin (TUA1) mRNA, complete cds blastn 35949 274 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca bovis
11288917 11288917 PRJNA421571_P_NODE_33609_length_538_cov_1.346237_g31072_i0 PRJNA421571 33609 538 1.346237 7.24275506 Eukaryota 2759 Plants Plants 228 8.179999999999997e-55   NTclustered gi|926781159|ref|XM_014043600.1| 145388 g31072 i0 77.604 5.69330855018587 384 80 71 5 12 391 2677 3058 Monoraphidium neglectum hypothetical protein mRNA blastn 3063 228 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
11289495 11289495 PRJNA421571_P_NODE_84689_length_266_cov_1.507772_g82140_i0 PRJNA421571 84689 266 1.507772 4.01067352 Eukaryota 2759 Plants Plants 58.4 5.23e-4   NTclustered gi|302830208|ref|XM_002946625.1| 3068 g82140 i0 94.595 11.9924812030075 37 2 14 0 28 64 6880 6844 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_86859), partial mRNA blastn 3190 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
14452007 14452007 PRJNA421571_P_NODE_44852_length_425_cov_1.750000_g42304_i0 PRJNA421571 44852 425 1.75 7.4375 Tetraselmis sp. CCMP 881 1812852 Plants Plants 137 1.1e-27   NTclustered gi|1778428824|gb|MN642087.1| 1812852 g42304 i0 80.925 18.0917647058824 173 33 41 0 191 363 14221 14049 Tetraselmis sp. CCMP 881 mitochondrion, complete genome blastn 7689 137 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Tetraselmis Tetraselmis sp. CCMP 881
15114072 15114072 PRJNA421571_P_NODE_95472_length_249_cov_0.875000_g92923_i0 PRJNA421571 95472 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 52.8 0.023   NTclustered gi|2082247681|ref|XM_043063043.1| 3055 g92923 i0 100 0.674698795180723 28 0 11 0 175 202 2524 2497 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g277801v5), mRNA blastn 168 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16999318 16999318 PRJNA421571_P_NODE_107074_length_241_cov_0.916667_g104525_i0 PRJNA421571 107074 241 0.916667 2.20916747 Chlamydomonas reinhardtii 3055 Plants Plants 124 4.53e-24   NTclustered gi|2082237163|ref|XM_043058766.1| 3055 g104525 i0 78.462 1.61825726141079 195 38 80 4 41 233 854 662 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g039250v5), mRNA blastn 390 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17001541 17001541 PRJNA421571_P_NODE_84614_length_266_cov_1.595855_g82065_i0 PRJNA421571 84614 266 1.595855 4.2449743 Jaagichlorella roystonensis 1052852 Plants Plants 62.1 4.04e-5   NTclustered gi|1819291170|ref|NC_046060.1| 1052852 g82065 i0 81.333 11.7330827067669 75 14 28 0 123 197 76563 76637 Jaagichlorella roystonensis mitochondrion, complete genome blastn 3121 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Jaagichlorella Jaagichlorella roystonensis
18275295 18275295 PRJNA421571_P_NODE_63755_length_325_cov_1.817460_g61206_i0 PRJNA421571 63755 325 1.81746 5.906745 Monoraphidium neglectum 145388 Plants Plants 63.9 1.41e-5   NTclustered gi|926791790|ref|XM_014048915.1| 145388 g61206 i0 82.667 1.19076923076923 75 10 22 2 42 113 1112 1186 Monoraphidium neglectum WD repeat, SAM and U-box domain-containing protein 1 mRNA blastn 387 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
18275636 18275636 PRJNA421571_P_NODE_77195_length_284_cov_1.094787_g74646_i0 PRJNA421571 77195 284 1.094787 3.10919508 Monoraphidium neglectum 145388 Plants Plants 54.7 0.007   NTclustered gi|926778811|ref|XM_014042426.1| 145388 g74646 i0 96.97 0.313380281690141 33 0 12 1 23 55 387 356 Monoraphidium neglectum hypothetical protein mRNA blastn 89 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
19547721 19547721 PRJNA421571_P_NODE_104056_length_243_cov_0.905882_g101507_i0 PRJNA421571 104056 243 0.905882 2.20129326 Auxenochlorella protothecoides 3075 Plants Plants 113 9.91e-21   NTclustered gi|760443576|ref|XM_011400555.1| 3075 g101507 i0 76.682 24.7201646090535 223 40 91 7 1 220 629 416 Auxenochlorella protothecoides 60S ribosomal protein L10a-3 partial mRNA blastn 6007 113 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
20824105 20824105 PRJNA421571_P_NODE_22157_length_742_cov_5.869955_g19780_i0 PRJNA421571 22157 742 5.869955 43.5550661 Monoraphidium neglectum 145388 Plants Plants 339 5.099999999999998e-88   NTclustered gi|926773763|ref|XM_014039902.1| 145388 g19780 i0 79.641 41.1388140161725 501 78 66 22 17 505 1 489 Monoraphidium neglectum 60S ribosomal protein L19-2 mRNA blastn 30525 339 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
20824859 20824859 PRJNA421571_P_NODE_45637_length_419_cov_2.254335_g43089_i0 PRJNA421571 45637 419 2.254335 9.44566365 Chlorella variabilis 554065 Plants Plants 457 7.31e-124   NTclustered gi|552844675|ref|XM_005851082.1| 554065 g43089 i0 92.722 75.0525059665871 316 23 75 0 104 419 89 404 Chlorella variabilis alpha-tubulin (CHLNCDRAFT_33793) mRNA, complete cds blastn 31447 457 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
20825145 20825145 PRJNA421571_P_NODE_55697_length_358_cov_2.249123_g53148_i0 PRJNA421571 55697 358 2.249123 8.05186034 Monoraphidium neglectum 145388 Plants Plants 243 1.8700000000000001e-59   NTclustered gi|926773395|ref|XM_014039718.1| 145388 g53148 i0 81.23 17.4106145251397 309 51 85 6 1 305 213 518 Monoraphidium neglectum ADP-ribosylation factor 1 mRNA blastn 6233 243 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
22100810 22100810 PRJNA421571_P_NODE_88118_length_258_cov_2.135135_g85569_i0 PRJNA421571 88118 258 2.135135 5.5086483 Chlamydomonas reinhardtii 3055 Plants Plants 206 1.6999999999999998e-48   NTclustered gi|2082269639|ref|XM_001691626.2| 3055 g85569 i0 82.969 28.1201550387597 229 37 88 2 23 250 656 883 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_17g710150v5), mRNA blastn 7255 206 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22100971 22100971 PRJNA421571_P_NODE_95478_length_249_cov_0.875000_g92929_i0 PRJNA421571 95478 249 0.875 2.17875 Bryopsis sp. EE4 619697 Plants Plants 163 9.980000000000001e-36   NTclustered gi|224593182|gb|FJ715689.1| 619697 g92929 i0 78.629 62.6827309236948 248 51 99 2 3 249 499 745 Bryopsis sp. EE4 translation elongation factor-1 alpha mRNA, partial cds blastn 15608 163 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. EE4
22101026 22101026 PRJNA421571_P_NODE_98178_length_247_cov_0.885057_g95629_i0 PRJNA421571 98178 247 0.885057 2.18609079 Chlamydomonas reinhardtii 3055 Plants Plants 287 5.62e-73   NTclustered gi|18122|emb|X61624.1| 3055 g95629 i0 87.755 12.8542510121457 245 30 99 0 2 246 369 613 Chlamydomonas reinhardtii atp2 (atpB) mRNA blastn 3175 287 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22763282 22763282 PRJNA421571_P_NODE_97978_length_247_cov_0.885057_g95429_i0 PRJNA421571 97978 247 0.885057 2.18609079 Chlamydomonadales 3042 Plants Plants 110 1.31e-19   NTclustered gi|2082248303|ref|XM_001695399.2| 3055 g95429 i0 85.577 4.23886639676113 104 15 42 0 144 247 574 471 Chlamydomonas reinhardtii ribosomal protein L23a (CHLRE_06g282500v5), mRNA blastn 1047 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23376549 23376549 PRJNA421571_P_NODE_93299_length_250_cov_0.870056_g90750_i0 PRJNA421571 93299 250 0.870056 2.17514 Chlorella variabilis 554065 Plants Plants 182 2.769999999999999e-41   NTclustered gi|552811974|ref|XM_005843541.1| 554065 g90750 i0 79.921 5.796 254 46 100 4 1 250 726 474 Chlorella variabilis casein protein kinase 2 alpha subunit (CHLNCDRAFT_37369) mRNA, complete cds blastn 1449 182 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
24648746 24648746 PRJNA421571_P_NODE_23460_length_713_cov_3.607813_g21041_i0 PRJNA421571 23460 713 3.607813 25.72370669 Chlamydomonas reinhardtii 3055 Plants Plants 418 6.1e-112   NTclustered gi|2082248650|ref|XM_043063418.1| 3055 g21041 i0 80.104 69.0224403927069 578 101 80 13 42 612 287 857 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA blastn 49213 418 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;