RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA421571" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA421571 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2973176 2973176 PRJNA421571_P_NODE_26423_length_653_cov_1.606897_g23939_i0 PRJNA421571 26423 653 1.606897 10.49303741 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 719 0   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g23939 i0 86.79 133.424196018377 651 79 99 4 4 650 3681324 3681971 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 87126 719 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
13175619 13175619 PRJNA421571_P_NODE_103411_length_243_cov_0.905882_g100862_i0 PRJNA421571 103411 243 0.905882 2.20129326 Prochlorococcus sp. MIT 1011 3082520 Bacteria Bacteria 54.7 0.006   NTclustered gi|2895599930|gb|CP138983.1| 3082520 g100862 i0 100 0.119341563786008 29 0 12 0 155 183 1493733 1493761 Prochlorococcus sp. MIT 1011 chromosome, complete genome blastn 29 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Prochlorococcaceae Prochlorococcus Prochlorococcus sp. MIT 1011
13178139 13178139 PRJNA421571_P_NODE_94951_length_249_cov_0.875000_g92402_i0 PRJNA421571 94951 249 0.875 2.17875 Planktothricoides raciborskii 132608 Bacteria Bacteria 75 4.81e-9   NTclustered gi|2754673971|gb|CP159837.1| 2792601 g92402 i0 91.071 13.3172690763052 56 3 22 1 77 132 4742346 4742293 Planktothricoides raciborskii GIHE-MW2 chromosome, complete genome blastn 3316 75 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Oscillatoriaceae Planktothricoides Planktothricoides raciborskii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;