RNAquarium Metadata Server
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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA416866" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA416866 · 16 ✖

analysis 1

  • blastn · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
419635 419635 PRJNA416866_P_NODE_8961_length_214_cov_4.549020_g8817_i0 PRJNA416866 8961 214 4.54902 9.7349028 Adineta vaga 104782 Rotifera other_Eukaryota 374 3.539999999999999e-99   NTclustered gi|259129963|gb|GQ398061.1| 104782 g8817 i0 98.131 3.14485981308411 214 4 100 0 1 214 10184 10397 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 673 374 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
2970370 2970370 PRJNA416866_P_NODE_8623_length_219_cov_2.018987_g8479_i0 PRJNA416866 8623 219 2.018987 4.42158153 Adineta vaga 104782 Rotifera other_Eukaryota 252 1.78e-62   NTclustered gi|402761739|gb|JX184001.1| 104782 g8479 i0 88.152 86.986301369863 211 25 96 0 9 219 1209 999 Adineta vaga cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 19050 252 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
2970372 2970372 PRJNA416866_P_NODE_903_length_765_cov_26.808239_g774_i0 PRJNA416866 903 765 26.808239 205.08302835 Philodina citrina 468664 Rotifera other_Eukaryota 678 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g774 i0 83.031 23.0235294117647 772 107 99 20 2 762 1656 2414 Philodina citrina complete mitochondrial genome blastn 17613 678 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
4911761 4911761 PRJNA416866_P_NODE_3684_length_346_cov_3.077193_g3541_i0 PRJNA416866 3684 346 3.077193 10.64708778 Adinetidae 104780 Rotifera other_Eukaryota 634 2.5599999999999996e-177   NTclustered gi|2537903788|gb|KM043253.2| 104782 g3541 i0 99.711 99.8670520231214 346 1 100 0 1 346 559 904 Adineta vaga voucher AD006 18S ribosomal RNA gene, partial sequence blastn 34554 634 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
7461688 7461688 PRJNA416866_P_NODE_1126_length_670_cov_5.796388_g989_i0 PRJNA416866 1126 670 5.796388 38.8357996 Adineta 104781 Rotifera other_Eukaryota 1210 0   NTclustered gi|1005055512|gb|KU860655.1| 1813164 g989 i0 99.254 41.0507462686567 670 5 100 0 1 670 1435 2104 Adineta vaga complex sp. A JFF-2016 isolate H001 28S ribosomal RNA gene, partial sequence blastn 27504 1210 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. A JFF-2016
8072950 8072950 PRJNA416866_P_NODE_11127_length_203_cov_1.408451_g10983_i0 PRJNA416866 11127 203 1.408451 2.85915553 Philodina citrina 468664 Rotifera other_Eukaryota 268 1.6099999999999998e-67   NTclustered gi|407227484|emb|FR856884.1| 468664 g10983 i0 90.594 86.9261083743842 202 19 99 0 1 202 220 19 Philodina citrina complete mitochondrial genome blastn 17646 268 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
8736620 8736620 PRJNA416866_P_NODE_11387_length_202_cov_3.624113_g11243_i0 PRJNA416866 11387 202 3.624113 7.32070826 Eurotatoria 2816136 Rotifera other_Eukaryota 374 3.3e-99   NTclustered gi|2537903921|gb|JX494739.2| 104782 g11243 i0 100 100.009900990099 202 0 100 0 1 202 77 278 Adineta vaga isolate O1 18S ribosomal RNA gene, partial sequence blastn 20202 374 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
8736639 8736639 PRJNA416866_P_NODE_4927_length_295_cov_5.807692_g4783_i0 PRJNA416866 4927 295 5.807692 17.1326914 Adineta 104781 Rotifera other_Eukaryota 529 1.0399999999999996e-145   NTclustered gi|72153731|gb|DQ089739.1| 104782 g4783 i0 98.983 91.9559322033898 295 3 100 0 1 295 797 503 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 27127 529 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
13837225 13837225 PRJNA416866_P_NODE_3631_length_349_cov_7.315972_g3488_i0 PRJNA416866 3631 349 7.315972 25.53274228 Opisthokonta 33154 Rotifera other_Eukaryota 628 1.1999999999999999e-175   NTclustered gi|259129963|gb|GQ398061.1| 104782 g3488 i0 99.14 76.9914040114613 349 3 100 0 1 349 6650 6998 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 26870 628 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
14448530 14448530 PRJNA416866_P_NODE_2232_length_459_cov_2.412060_g2089_i0 PRJNA416866 2232 459 2.41206 11.0713554 Adineta vaga 104782 Rotifera other_Eukaryota 566 1.29e-156   NTclustered gi|134141758|gb|EF173243.1| 104782 g2089 i0 88.913 97.9368191721133 460 49 100 2 1 459 190 648 Adineta vaga isolate FR.3.1 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 44953 566 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
15722323 15722323 PRJNA416866_P_NODE_1573_length_553_cov_6.642276_g1432_i0 PRJNA416866 1573 553 6.642276 36.73178628 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 612 1.9899999999999998e-170   NTclustered gi|402761761|gb|JX184012.1| 104788 g1432 i0 86.667 9.07414104882459 555 70 100 4 1 553 72 624 Macrotrachela quadricornifera isolate CR cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 5018 612 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
16997059 16997059 PRJNA416866_P_NODE_1774_length_519_cov_4.718341_g1632_i0 PRJNA416866 1774 519 4.718341 24.48818979 Habrotrocha constricta 104786 Rotifera other_Eukaryota 538 3.2e-148   NTclustered gi|402761773|gb|JX184018.1| 104786 g1632 i0 85.521 1.27167630057803 518 72 99 3 3 519 199 714 Habrotrocha constricta cytochrome c oxidase subunit 3 (COX3) gene, complete cds; mitochondrial blastn 660 538 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
16997064 16997064 PRJNA416866_P_NODE_2554_length_427_cov_2.601093_g2411_i0 PRJNA416866 2554 427 2.601093 11.10666711 Habrotrocha constricta 104786 Rotifera other_Eukaryota 540 7.21e-149   NTclustered gi|402761725|gb|JX183994.1| 104786 g2411 i0 89.535 4.00936768149883 430 40 100 5 1 427 192 619 Habrotrocha constricta ATP synthase F0 subunit 6 (ATP6) gene, partial cds; mitochondrial blastn 1712 540 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
16997072 16997072 PRJNA416866_P_NODE_4114_length_325_cov_1.939394_g3971_i0 PRJNA416866 4114 325 1.939394 6.3030305 Adineta vaga 104782 Rotifera other_Eukaryota 579 1.1299999999999997e-160   NTclustered gi|72153731|gb|DQ089739.1| 104782 g3971 i0 98.769 53.0615384615385 325 4 100 0 1 325 2746 2422 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 17245 579 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
18271314 18271314 PRJNA416866_P_NODE_9135_length_212_cov_2.543046_g8991_i0 PRJNA416866 9135 212 2.543046 5.39125752 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 180 8.19e-41   NTclustered gi|402761775|gb|JX184019.1| 104788 g8991 i0 84.239 3.47169811320755 184 29 87 0 2 185 16 199 Macrotrachela quadricornifera isolate MQ cytochrome c oxidase subunit 3 (COX3) gene, complete cds; mitochondrial blastn 736 180 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
19545510 19545510 PRJNA416866_P_NODE_9056_length_213_cov_2.052632_g8912_i0 PRJNA416866 9056 213 2.052632 4.37210616 Habrotrocha constricta 104786 Rotifera other_Eukaryota 263 7.95e-66   NTclustered gi|402761741|gb|JX184002.1| 104786 g8912 i0 89.423 84.1549295774648 208 22 98 0 6 213 971 764 Habrotrocha constricta cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 17925 263 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;