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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA416866" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA416866 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1083771 1083771 PRJNA416866_P_NODE_9381_length_209_cov_4.324324_g9237_i0 PRJNA416866 9381 209 4.324324 9.03783716 Fungi 4751 Fungi Fungi 387 4.42e-103   NTclustered gi|658131632|emb|HF968958.1| 4874 g9237 i0 100 147.033492822967 209 0 100 0 1 209 1993 2201 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 30730 387 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
2970358 2970358 PRJNA416866_P_NODE_5123_length_289_cov_44.267544_g4979_i0 PRJNA416866 5123 289 44.267544 127.93320216 Umbelopsis ramanniana 41833 Fungi Fungi 281 3.13e-71   NTclustered gi|2323695494|ref|XM_051584821.1| 1314678 g4979 i0 85.091 251.010380622837 275 41 96 0 7 281 87 361 Umbelopsis ramanniana AG uncharacterized protein (K450DRAFT_214084), mRNA blastn 72542 281 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis ramanniana
4246689 4246689 PRJNA416866_P_NODE_12224_length_186_cov_7.384000_g12080_i0 PRJNA416866 12224 186 7.384 13.73424 Phycomyces blakesleeanus 4837 Fungi Fungi 82.4 2.03e-11   NTclustered gi|1069953767|ref|XM_018429605.1| 763407 g12080 i0 92.857 0.956989247311828 56 4 30 0 77 132 521 576 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 178 82.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
10623534 10623534 PRJNA416866_P_NODE_4349_length_316_cov_1.733333_g4206_i0 PRJNA416866 4349 316 1.733333 5.47733228 Umbelopsis isabellina 91625 Fungi Fungi 244 4.55e-60   NTclustered gi|11078267|gb|AF157300.1|AF157300 91625 g4206 i0 83.032 65.1962025316456 277 40 86 6 44 316 982 1255 Umbelopsis isabellina translation elongation factor 1-alpha (EF-1alpha) gene, partial cds blastn 20602 244 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis isabellina
11898458 11898458 PRJNA416866_P_NODE_11150_length_203_cov_1.338028_g11006_i0 PRJNA416866 11150 203 1.338028 2.71619684 Absidia idahoensis 572091 Fungi Fungi 198 2.1499999999999998e-46   NTclustered gi|210161799|gb|EU826383.1| 572091 g11006 i0 84.772 91.6453201970443 197 30 97 0 6 202 628 824 Absidia idahoensis strain FSU6198 clone 2 translation elongation factor 1alpha gene, partial cds blastn 18604 198 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Absidia Absidia idahoensis
15722357 15722357 PRJNA416866_P_NODE_9313_length_210_cov_2.536913_g9169_i0 PRJNA416866 9313 210 2.536913 5.3275173 Mucor racemosus 4841 Fungi Fungi 388 1.24e-103   NTclustered gi|225134681|gb|FJ345353.1| 4841 g9169 i0 100 37.6714285714286 210 0 100 0 1 210 3984 3775 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7911 388 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
18271296 18271296 PRJNA416866_P_NODE_5455_length_280_cov_1.168950_g5311_i0 PRJNA416866 5455 280 1.16895 3.27306 Rhizopus delemar 936053 Fungi Fungi 222 1.86e-53   NTclustered gi|2797475454|ref|XM_067666893.1| 246409 g5311 i0 83.613 29.4857142857143 238 38 85 1 24 260 303 66 Rhizopus delemar RA 99-880 60S ribosomal protein eL42 (RO3G_12309), partial mRNA blastn 8256 222 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
22096101 22096101 PRJNA416866_P_NODE_6538_length_255_cov_0.969072_g6394_i0 PRJNA416866 6538 255 0.969072 2.4711336 Rhizopus delemar 936053 Fungi Fungi 189 1.69e-43   NTclustered gi|2797463157|ref|XM_067662474.1| 246409 g6394 i0 86.364 25.7686274509804 176 21 68 3 2 175 289 115 Rhizopus delemar RA 99-880 60S ribosomal protein L3 (RO3G_07884), partial mRNA blastn 6571 189 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;