contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA415856" and tax_superkingdom = "Archaea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 419232 | 419232 | PRJNA415856_P_NODE_23501_length_186_cov_1.489051_g23240_i0 | PRJNA415856 | 23501 | 186 | 1.489051 | 2.76963486 | Methanobrevibacter millerae | 230361 | Archaea | Archaea | 281 | 1.86e-71 | NTclustered | gi|968564921|gb|CP011266.1| | 230361 | g23240 | i0 | 94.054 | 68.6881720430108 | 185 | 11 | 99 | 0 | 1 | 185 | 541982 | 542166 | Methanobrevibacter millerae strain SM9, complete genome | blastn | 12776 | 281 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter millerae | |
| 1694175 | 1694175 | PRJNA415856_P_NODE_362_length_1443_cov_4.523673_g283_i0 | PRJNA415856 | 362 | 1443 | 4.523673 | 65.27660139 | uncultured archaeon | 115547 | Archaea | Archaea | 2505 | 0 | NTclustered | gi|326537486|gb|JF304140.1| | 115547 | g283 | i0 | 98.521 | 97.3215523215523 | 1420 | 20 | 98 | 1 | 1 | 1419 | 15 | 1434 | Uncultured archaeon clone 3(31) 16S ribosomal RNA gene, partial sequence | blastn | 140435 | 2505 | 1 | Archaea | uncultured archaeon | ||||||||
| 4246344 | 4246344 | PRJNA415856_P_NODE_28704_length_176_cov_2.425197_g28443_i0 | PRJNA415856 | 28704 | 176 | 2.425197 | 4.26834672 | Methanobrevibacter millerae | 230361 | Archaea | Archaea | 207 | 2.99e-49 | NTclustered | gi|968564921|gb|CP011266.1| | 230361 | g28443 | i0 | 88.068 | 3.04545454545455 | 176 | 20 | 100 | 1 | 1 | 176 | 542826 | 543000 | Methanobrevibacter millerae strain SM9, complete genome | blastn | 536 | 207 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter millerae | |
| 10623310 | 10623310 | PRJNA415856_P_NODE_47749_length_163_cov_0.894737_g47488_i0 | PRJNA415856 | 47749 | 163 | 0.894737 | 1.45842131 | Methanomassiliicoccaceae archaeon DOK | 1535962 | Archaea | Archaea | 279 | 5.73e-71 | NTclustered | gi|1799215713|gb|CP047880.1| | 1535962 | g47488 | i0 | 97.546 | 1 | 163 | 4 | 100 | 0 | 1 | 163 | 1513968 | 1514130 | Methanomassiliicoccaceae archaeon DOK chromosome, complete genome | blastn | 163 | 279 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmata | Methanomassiliicoccales | Methanomassiliicoccaceae | Methanomassiliicoccaceae archaeon DOK | |||
| 11286582 | 11286582 | PRJNA415856_P_NODE_1169_length_910_cov_4.167247_g1003_i0 | PRJNA415856 | 1169 | 910 | 4.167247 | 37.9219477 | Nitrososphaera | 497726 | Archaea | Archaea | 1123 | 0 | NTclustered | gi|300521484|gb|GU797787.1| | 497727 | g1003 | i0 | 89.207 | 52.810989010989 | 908 | 87 | 99 | 10 | 6 | 909 | 921 | 21 | Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence | blastn | 48058 | 1123 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaera | Candidatus Nitrososphaera gargensis | ||
| 12562350 | 12562350 | PRJNA415856_P_NODE_8090_length_321_cov_4.080882_g7829_i0 | PRJNA415856 | 8090 | 321 | 4.080882 | 13.09963122 | Candidatus Nitrosocosmicus | 1826864 | Archaea | Archaea | 503 | 6.92e-138 | NTclustered | gi|388254672|gb|JQ768092.1| | 115547 | g7829 | i0 | 95 | 85.1557632398754 | 320 | 16 | 99 | 0 | 2 | 321 | 27206 | 27525 | Uncultured archaeon clone 02j05, complete sequence | blastn | 27335 | 503 | 1 | Archaea | uncultured archaeon | ||||||||
| 13173068 | 13173068 | PRJNA415856_P_NODE_311_length_1522_cov_3.315682_g241_i0 | PRJNA415856 | 311 | 1522 | 3.315682 | 50.46468004 | uncultured crenarchaeote | 29281 | Archaea | Archaea | 2206 | 0 | NTclustered | gi|22797874|emb|AJ496176.1| | 29281 | g241 | i0 | 92.857 | 102.687253613666 | 1526 | 99 | 100 | 8 | 1 | 1522 | 6919 | 8438 | Uncultured crenarchaeote 34 kb genomic fragment | blastn | 156290 | 2206 | 1 | Archaea | Thermoproteati | Thermoproteota | uncultured crenarchaeote | ||||||
| 17660934 | 17660934 | PRJNA415856_P_NODE_23354_length_186_cov_2.321168_g23093_i0 | PRJNA415856 | 23354 | 186 | 2.321168 | 4.31737248 | root | 1 | Root_unresolved | Root_unresolved | 344 | 2.34e-90 | NTclustered | gi|1294447101|gb|CP017803.1| | 2173 | g23093 | i0 | 100 | 179.618279569892 | 186 | 0 | 100 | 0 | 1 | 186 | 266643 | 266458 | Methanobrevibacter smithii strain KB11 chromosome, complete genome | blastn | 33409 | 344 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter smithii | |
| 17660962 | 17660962 | PRJNA415856_P_NODE_2674_length_611_cov_26.439502_g2436_i0 | PRJNA415856 | 2674 | 611 | 26.439502 | 161.54535722 | root | 1 | Root_unresolved | Root_unresolved | 1088 | 0 | NTclustered | gi|2621785414|emb|OY781872.1| | 1005933 | g2436 | i0 | 98.852 | 398.576104746318 | 610 | 7 | 99 | 0 | 1 | 610 | 3115894 | 3116503 | MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 | blastn | 243530 | 1088 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanoregulaceae | Methanoregula | uncultured Methanoregula sp. | |
| 20821033 | 20821033 | PRJNA415856_P_NODE_30377_length_174_cov_1.224000_g30116_i0 | PRJNA415856 | 30377 | 174 | 1.224 | 2.12976 | Methanobrevibacter sp. YE315 | 1609968 | Archaea | Archaea | 298 | 1.7e-76 | NTclustered | gi|985614202|gb|CP010834.1| | 1609968 | g30116 | i0 | 97.701 | 105 | 174 | 3 | 100 | 1 | 1 | 174 | 497437 | 497265 | Methanobrevibacter sp. YE315, complete genome | blastn | 18270 | 298 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter sp. YE315 | |
| 21485364 | 21485364 | PRJNA415856_P_NODE_9657_length_287_cov_2.310924_g9396_i0 | PRJNA415856 | 9657 | 287 | 2.310924 | 6.63235188 | Nitrososphaera | 497726 | Archaea | Archaea | 479 | 1.0299999999999996e-130 | NTclustered | gi|300521484|gb|GU797787.1| | 497727 | g9396 | i0 | 97.5 | 42.3728222996516 | 280 | 7 | 98 | 0 | 6 | 285 | 921 | 642 | Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence | blastn | 12161 | 479 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaera | Candidatus Nitrososphaera gargensis | ||
| 25309521 | 25309521 | PRJNA415856_P_NODE_17720_length_207_cov_1.094937_g17459_i0 | PRJNA415856 | 17720 | 207 | 1.094937 | 2.26651959 | Nitrososphaera | 497726 | Archaea | Archaea | 316 | 5.819999999999998e-82 | NTclustered | gi|300521484|gb|GU797787.1| | 497727 | g17459 | i0 | 94.203 | 36.0821256038647 | 207 | 12 | 100 | 0 | 1 | 207 | 1772 | 1566 | Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence | blastn | 7469 | 316 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaera | Candidatus Nitrososphaera gargensis | ||
| 25309582 | 25309582 | PRJNA415856_P_NODE_26960_length_179_cov_3.115385_g26699_i0 | PRJNA415856 | 26960 | 179 | 3.115385 | 5.57653915 | Nitrososphaera | 497726 | Archaea | Archaea | 274 | 2.97e-69 | NTclustered | gi|388254672|gb|JQ768092.1| | 115547 | g26699 | i0 | 94.382 | 23.9608938547486 | 178 | 10 | 99 | 0 | 2 | 179 | 29066 | 29243 | Uncultured archaeon clone 02j05, complete sequence | blastn | 4289 | 274 | 1 | Archaea | uncultured archaeon | ||||||||
| 25309718 | 25309718 | PRJNA415856_P_NODE_52100_length_161_cov_0.910714_g51839_i0 | PRJNA415856 | 52100 | 161 | 0.910714 | 1.46624954 | Methanobrevibacter | 2172 | Archaea | Archaea | 298 | 1.56e-76 | NTclustered | gi|2791693311|gb|CP144200.1| | 2173 | g51839 | i0 | 100 | 102.422360248447 | 161 | 0 | 100 | 0 | 1 | 161 | 1474687 | 1474527 | Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome | blastn | 16490 | 298 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter smithii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;