RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA415636" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA415636 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
419109 419109 PRJNA415636_S_NODE_4161_length_245_cov_1.545455_g4114_i0 PRJNA415636 4161 245 1.545455 3.78636475 Pseudozyma flocculosa 84751 Fungi Fungi 84.2 7.84e-12   NTclustered gi|630964345|ref|XM_007880390.1| 1277687 g4114 i0 84.524 0.342857142857143 84 13 34 0 27 110 217 300 Pseudozyma flocculosa PF-1 uncharacterized protein (PFL1_02877), partial mRNA blastn 84 84.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma flocculosa
6796860 6796860 PRJNA415636_S_NODE_4066_length_247_cov_2.295000_g4019_i0 PRJNA415636 4066 247 2.295 5.66865 Malassezia globosa 76773 Fungi Fungi 281 2.62e-71   NTclustered gi|164662814|ref|XM_001732477.1| 425265 g4019 i0 98.137 2.02834008097166 161 3 65 0 87 247 411 251 Malassezia globosa CBS 7966 uncharacterized protein (MGL_0304), partial mRNA blastn 501 281 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
9347247 9347247 PRJNA415636_S_NODE_5468_length_220_cov_0.919075_g5421_i0 PRJNA415636 5468 220 0.919075 2.021965 Malassezia restricta 76775 Fungi Fungi 390 3.629999999999999e-104   NTclustered gi|1546638449|ref|XM_027630866.1| 76775 g5421 i0 98.636 1 220 3 100 0 1 220 1728 1947 Malassezia restricta 25S rRNA (cytosine2870-C5)-methyltransferase (MRET_4239), partial mRNA blastn 220 390 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
20820835 20820835 PRJNA415636_S_NODE_5217_length_224_cov_2.016949_g5170_i0 PRJNA415636 5217 224 2.016949 4.51796576 Malassezia restricta 76775 Fungi Fungi 392 1.0299999999999999e-104   NTclustered gi|1546630665|ref|XM_027626993.1| 76775 g5170 i0 98.214 1 224 4 100 0 1 224 1474 1697 Malassezia restricta uncharacterized protein (MRET_0366), partial mRNA blastn 224 392 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
24035019 24035019 PRJNA415636_S_NODE_2159_length_315_cov_1.902985_g2112_i0 PRJNA415636 2159 315 1.902985 5.99440275 Ustilaginaceae 5268 Fungi Fungi 171 7.8e-38   NTclustered gi|758975134|ref|XM_011389320.1| 5270 g2112 i0 88.732 11.2666666666667 142 12 44 3 4 143 305 444 Mycosarcoma maydis 60S ribosomal protein eL19 (UMAG_01634), partial mRNA blastn 3549 172 0.994186046511628 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis
24645524 24645524 PRJNA415636_S_NODE_6040_length_211_cov_1.628049_g5993_i0 PRJNA415636 6040 211 1.628049 3.43518339 Malassezia restricta 76775 Fungi Fungi 390 3.459999999999999e-104   NTclustered gi|1546633326|ref|XM_027628323.1| 76775 g5993 i0 100 1 211 0 100 0 1 211 1213 1003 Malassezia restricta beta-1,4-mannosyltransferase (MRET_1696), partial mRNA blastn 211 390 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
25309418 25309418 PRJNA415636_S_NODE_2300_length_307_cov_2.211538_g2253_i0 PRJNA415636 2300 307 2.211538 6.78942166 Malassezia 55193 Fungi Fungi 556 4.98e-154   NTclustered gi|1321659599|gb|KY911093.1| 76775 g2253 i0 99.351 43.1302931596091 308 0 100 2 1 307 382 688 Malassezia restricta mitochondrion, complete genome blastn 13241 556 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;