contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA414225" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 418971 | 418971 | PRJNA414225_P_NODE_66201_length_165_cov_0.879310_g66114_i0 | PRJNA414225 | 66201 | 165 | 0.87931 | 1.4508615 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 178 | 2.18e-40 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g66114 | i0 | 86.42 | 4.89090909090909 | 162 | 22 | 98 | 0 | 3 | 164 | 1240734 | 1240895 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 807 | 178 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 418982 | 418982 | PRJNA414225_P_NODE_70021_length_164_cov_0.904348_g69934_i0 | PRJNA414225 | 70021 | 164 | 0.904348 | 1.48313072 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 159 | 7.84e-35 | NTclustered | gi|2531976028|emb|OY282361.1| | 2910168 | g69934 | i0 | 84.81 | 152.646341463415 | 158 | 24 | 96 | 0 | 1 | 158 | 903830 | 903987 | MAG: Longimicrobiales bacterium genome assembly, chromosome: 1 | blastn | 25034 | 159 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 4245991 | 4245991 | PRJNA414225_P_NODE_4124_length_253_cov_3.220588_g4037_i0 | PRJNA414225 | 4124 | 253 | 3.220588 | 8.14808764 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 206 | 1.67e-48 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g4037 | i0 | 87.931 | 12.9367588932806 | 174 | 21 | 69 | 0 | 24 | 197 | 1903281 | 1903454 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 3273 | 206 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 4246066 | 4246066 | PRJNA414225_P_NODE_75724_length_163_cov_2.684211_g75637_i0 | PRJNA414225 | 75724 | 163 | 2.684211 | 4.37526393 | uncultured Gemmatimonas sp. | 221169 | Bacteria | Bacteria | 296 | 5.68e-76 | NTclustered | gi|192805021|emb|FM175823.1| | 221169 | g75637 | i0 | 100 | 94.4355828220859 | 160 | 0 | 98 | 0 | 4 | 163 | 170 | 11 | Uncultured Gemmatimonas sp. partial 16S rRNA gene, clone CL3.D92 | blastn | 15393 | 296 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | uncultured Gemmatimonas sp. | |
| 8072155 | 8072155 | PRJNA414225_P_NODE_1167_length_381_cov_1.530120_g1081_i0 | PRJNA414225 | 1167 | 381 | 1.53012 | 5.8297572 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 508 | 1.79e-139 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g1081 | i0 | 90.885 | 217.076115485564 | 384 | 28 | 100 | 5 | 1 | 381 | 1594123 | 1594502 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 82706 | 508 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8072160 | 8072160 | PRJNA414225_P_NODE_1387_length_353_cov_1.273026_g1300_i0 | PRJNA414225 | 1387 | 353 | 1.273026 | 4.49378178 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 259 | 1.83e-64 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g1300 | i0 | 86.555 | 217.875354107649 | 238 | 28 | 93 | 4 | 114 | 350 | 2605721 | 2605487 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 76910 | 259 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8072174 | 8072174 | PRJNA414225_P_NODE_2127_length_301_cov_2.444444_g2040_i0 | PRJNA414225 | 2127 | 301 | 2.444444 | 7.35777644 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 230 | 1.2099999999999995e-55 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g2040 | i0 | 83.137 | 292.56146179402 | 255 | 39 | 84 | 4 | 12 | 264 | 172308 | 172056 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 88061 | 230 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8072175 | 8072175 | PRJNA414225_P_NODE_21927_length_186_cov_1.240876_g21840_i0 | PRJNA414225 | 21927 | 186 | 1.240876 | 2.30802936 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 121 | 4.3e-23 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g21840 | i0 | 95.946 | 22.5967741935484 | 74 | 3 | 40 | 0 | 5 | 78 | 2290477 | 2290404 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 4203 | 121 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola | |
| 14447757 | 14447757 | PRJNA414225_P_NODE_1992_length_309_cov_1.780769_g1905_i0 | PRJNA414225 | 1992 | 309 | 1.780769 | 5.50257621 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 259 | 1.5800000000000002e-64 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g1905 | i0 | 85.603 | 329.236245954693 | 257 | 26 | 83 | 6 | 8 | 262 | 1904097 | 1904344 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 101734 | 259 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 14447847 | 14447847 | PRJNA414225_P_NODE_6492_length_230_cov_1.961326_g6405_i0 | PRJNA414225 | 6492 | 230 | 1.961326 | 4.5110498 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 292 | 1.11e-74 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g6405 | i0 | 89.565 | 154.739130434783 | 230 | 24 | 100 | 0 | 1 | 230 | 1592713 | 1592942 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 35590 | 292 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 15721618 | 15721618 | PRJNA414225_P_NODE_62593_length_165_cov_1.310345_g62506_i0 | PRJNA414225 | 62593 | 165 | 1.310345 | 2.16206925 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 202 | 1.29e-47 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g62506 | i0 | 89.157 | 302.036363636364 | 166 | 12 | 98 | 6 | 2 | 163 | 1902814 | 1902977 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 49836 | 202 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 24645306 | 24645306 | PRJNA414225_P_NODE_2860_length_276_cov_1.964758_g2773_i0 | PRJNA414225 | 2860 | 276 | 1.964758 | 5.42273208 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 171 | 6.72e-38 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g2773 | i0 | 85.89 | 326.213768115942 | 163 | 20 | 59 | 3 | 114 | 275 | 172997 | 173157 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 90035 | 171 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;