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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA414225" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 18 ✖

bioproject 1

  • PRJNA414225 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
418912 418912 PRJNA414225_P_NODE_39481_length_172_cov_1.658537_g39394_i0 PRJNA414225 39481 172 1.658537 2.85268364 Dinobryon cylindricum 420577 SAR_Eukaryotes SAR_Eukaryotes 235 1.33e-57   NTclustered gi|2445524902|gb|OQ453362.1| 3028919 g39394 i0 91.765 98.3546511627907 170 12 98 2 4 172 1532 1364 Dinobryon cylindricum var. palustre strain Joogyo2je043021MS12 large subunit ribosomal RNA gene, partial sequence blastn 16917 235 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Dinobryon Dinobryon cylindricum
3633915 3633915 PRJNA414225_P_NODE_1703_length_327_cov_2.089928_g1616_i0 PRJNA414225 1703 327 2.089928 6.83406456 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 169 2.93e-37   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1616 i0 96.117 0.944954128440367 103 4 31 0 1 103 2980 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 309 169 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
4245930 4245930 PRJNA414225_P_NODE_10224_length_210_cov_1.105590_g10137_i0 PRJNA414225 10224 210 1.10559 2.321739 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 289 1.29e-73   NTclustered gi|820695469|tpe|LN714488.1| 572307 g10137 i0 92.965 25.4714285714286 199 12 94 2 14 210 302112 302310 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 5349 289 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
4911123 4911123 PRJNA414225_P_NODE_29644_length_179_cov_1.569231_g29557_i0 PRJNA414225 29644 179 1.569231 2.80892349 Chromulinales 96792 SAR_Eukaryotes SAR_Eukaryotes 237 3.9e-58   NTclustered gi|323690577|gb|GU935636.1| 2986 g29557 i0 90.96 99.3854748603352 177 14 98 2 1 176 1176 1351 Ochromonas danica strain SAG 933.7 28S ribosomal RNA gene, partial sequence blastn 17790 237 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas danica
4911137 4911137 PRJNA414225_P_NODE_33064_length_176_cov_4.661417_g32977_i0 PRJNA414225 33064 176 4.661417 8.20409392 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 324 2.85e-84   NTclustered gi|363498776|gb|JN662487.1| 120398 g32977 i0 100 99.8806818181818 175 0 99 0 2 176 523 349 Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17579 324 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
4911236 4911236 PRJNA414225_P_NODE_75864_length_163_cov_2.149123_g75777_i0 PRJNA414225 75864 163 2.149123 3.50307049 root 1 Root_unresolved Root_unresolved 291 2.64e-74   NTclustered gi|833494852|ref|XM_012915026.1| 5866 g75777 i0 98.773 96.9877300613497 163 2 100 0 1 163 273 111 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 15809 291 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
7461039 7461039 PRJNA414225_P_NODE_2746_length_279_cov_2.195652_g2659_i0 PRJNA414225 2746 279 2.195652 6.12586908 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 510 3.5299999999999996e-140   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2659 i0 99.642 92.8817204301075 279 1 100 0 1 279 981 1259 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 25914 510 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
10011210 10011210 PRJNA414225_P_NODE_34268_length_176_cov_1.212598_g34181_i0 PRJNA414225 34268 176 1.212598 2.13417248 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 313 6.1699999999999985e-81   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g34181 i0 98.857 19.9147727272727 175 2 99 0 2 176 1451 1277 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 3505 313 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
10622902 10622902 PRJNA414225_P_NODE_81429_length_163_cov_0.894737_g81342_i0 PRJNA414225 81429 163 0.894737 1.45842131 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 239 9.72e-59   NTclustered gi|820695469|tpe|LN714488.1| 572307 g81342 i0 95.364 3.87730061349693 151 6 92 1 1 150 157473 157323 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 632 239 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
10622926 10622926 PRJNA414225_P_NODE_8989_length_216_cov_0.814371_g8902_i0 PRJNA414225 8989 216 0.814371 1.75904136 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 281 2.23e-71   NTclustered gi|820695469|tpe|LN714488.1| 572307 g8902 i0 90.278 71.1898148148148 216 20 99 1 2 216 116677 116892 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 15377 281 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
11897792 11897792 PRJNA414225_P_NODE_5210_length_241_cov_1.270833_g5123_i0 PRJNA414225 5210 241 1.270833 3.06270753 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 220 5.62e-53   NTclustered gi|820695469|tpe|LN714488.1| 572307 g5123 i0 91.772 33.9294605809129 158 13 98 0 1 158 302521 302678 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 8177 220 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
14447770 14447770 PRJNA414225_P_NODE_2492_length_287_cov_0.794118_g2405_i0 PRJNA414225 2492 287 0.794118 2.27911866 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 420 6.31e-113   NTclustered gi|820695469|tpe|LN714488.1| 572307 g2405 i0 93.31 36.7560975609756 284 19 100 0 4 287 116445 116162 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 10549 420 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
14447910 14447910 PRJNA414225_P_NODE_9232_length_214_cov_1.854545_g9145_i0 PRJNA414225 9232 214 1.854545 3.9687263 Aphanomyces sp. 1982524 SAR_Eukaryotes SAR_Eukaryotes 396 7.559999999999996e-106   NTclustered gi|1578815424|gb|MK546601.1| 1982524 g9145 i0 100 100.065420560748 214 0 100 0 1 214 352 565 Aphanomyces sp. voucher CCIBt4545 large subunit ribosomal RNA gene, partial sequence blastn 21414 396 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces sp.
16996402 16996402 PRJNA414225_P_NODE_6234_length_232_cov_1.661202_g6147_i0 PRJNA414225 6234 232 1.661202 3.85398864 Anthophysa vegetans 459040 SAR_Eukaryotes SAR_Eukaryotes 254 5.3e-63   NTclustered gi|161015692|gb|EF681926.1| 459040 g6147 i0 86.441 71.75 236 26 100 6 1 232 238 5 Anthophysa vegetans strain HFCC30 28S ribosomal RNA gene, partial sequence blastn 16646 254 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Anthophysa Anthophysa vegetans
17660775 17660775 PRJNA414225_P_NODE_82694_length_162_cov_3.601770_g82607_i0 PRJNA414225 82694 162 3.60177 5.8348674 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 300 4.36e-77   NTclustered gi|291495599|gb|GU823226.1| 152704 g82607 i0 100 100 162 0 100 0 1 162 856 695 Uncultured stramenopile clone BCA5F13RJ3F09 18S ribosomal RNA gene, partial sequence blastn 16200 300 1 Eukaryota Sar             uncultured stramenopile
20209413 20209413 PRJNA414225_P_NODE_77036_length_163_cov_1.350877_g76949_i0 PRJNA414225 77036 163 1.350877 2.20192951 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|855313788|ref|XM_013042842.1| 12968 g76949 i0 100 2.28220858895706 29 0 18 0 135 163 1540 1512 Blastocystis hominis mRNA blastn 372 54.7 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis hominis
23371000 23371000 PRJNA414225_P_NODE_379_length_679_cov_2.873016_g305_i0 PRJNA414225 379 679 2.873016 19.50777864 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 1127 0   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g305 i0 96.613 56.4418262150221 679 23 100 0 1 679 1531 2209 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 38324 1127 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
24645338 24645338 PRJNA414225_P_NODE_500_length_586_cov_2.847300_g421_i0 PRJNA414225 500 586 2.8473 16.685178 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 961 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g421 i0 96.398 43.8959044368601 583 21 99 0 1 583 67 649 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 25723 961 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;