RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA414225" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA414225 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6796660 6796660 PRJNA414225_P_NODE_33626_length_176_cov_1.606299_g33539_i0 PRJNA414225 33626 176 1.606299 2.82708624 Thermosynechococcus sp. 2814275 Bacteria Bacteria 209 8.33e-50   NTclustered gi|2314731918|dbj|AP024678.1| 2814275 g33539 i0 88.068 2.01704545454545 176 21 100 0 1 176 754846 755021 MAG: Thermosynechococcus sp. KatS3mg067 DNA, complete genome blastn 355 209 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Acaryochloridales Thermosynechococcaceae Thermosynechococcus Thermosynechococcus sp.
9347001 9347001 PRJNA414225_P_NODE_12108_length_202_cov_0.993464_g12021_i0 PRJNA414225 12108 202 0.993464 2.00679728 uncultured Chroococcidiopsis sp. 259957 Bacteria Bacteria 344 2.59e-90   NTclustered gi|225696240|gb|FJ805907.1| 259957 g12021 i0 97.99 135.232673267327 199 3 98 1 1 198 2725 2923 Uncultured Chroococcidiopsis sp. clone NA3_10 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 27317 344 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis uncultured Chroococcidiopsis sp.
15721599 15721599 PRJNA414225_P_NODE_52293_length_167_cov_0.864407_g52206_i0 PRJNA414225 52293 167 0.864407 1.44355969 Nostoc punctiforme 272131 Bacteria Bacteria 63.9 6.47e-6   NTclustered gi|186463002|gb|CP001037.1| 63737 g52206 i0 100 4.9940119760479 34 0 20 0 53 86 4752225 4752192 Nostoc punctiforme PCC 73102 strain ATCC 29133 chromosome, complete genome blastn 834 63.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc punctiforme

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;