RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA414036" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA414036 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14447626 14447626 PRJNA414036_P_NODE_39892_length_233_cov_2.075758_g38153_i0 PRJNA414036 39892 233 2.075758 4.83651614 Sycon ciliatum 27933 Porifera other_Eukaryota 52.8 0.021   NTclustered gi|2732938948|ref|XM_065336629.1| 27933 g38153 i0 100 0.240343347639485 28 0 12 0 17 44 6765 6738 PREDICTED: Sycon ciliatum mucin-2-like (LOC135823784), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
24645231 24645231 PRJNA414036_P_NODE_62660_length_206_cov_3.380117_g60921_i0 PRJNA414036 62660 206 3.380117 6.96304102 Corticium candelabrum 121492 Porifera other_Eukaryota 113 8.14e-21   NTclustered gi|2664225733|ref|XM_062666977.1| 121492 g60921 i0 77.901 0.878640776699029 181 40 88 0 10 190 2487 2307 PREDICTED: Corticium candelabrum pre-mRNA-processing-splicing factor 8 (LOC134197630), mRNA blastn 181 113 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;