RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA414036" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA414036 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
418659 418659 PRJNA414036_P_NODE_13441_length_396_cov_3.833795_g11800_i0 PRJNA414036 13441 396 3.833795 15.1818282 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.011   NTclustered gi|690489241|emb|LN033914.1| 99802 g11800 i0 100 0.0732323232323232 29 0 7 0 67 95 6891 6919 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0033214 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
6185951 6185951 PRJNA414036_P_NODE_23645_length_312_cov_2.617329_g21913_i0 PRJNA414036 23645 312 2.617329 8.16606648 Metazoa 33208 Platyhelminthes Platyhelminthes 52.8 0.029   NTclustered gi|690520673|emb|LN072066.1| 99802 g21913 i0 100 0.179487179487179 28 0 9 0 1 28 532 559 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0069459 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
8072116 8072116 PRJNA414036_P_NODE_7087_length_478_cov_3.661400_g5865_i0 PRJNA414036 7087 478 3.6614 17.501492 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 54.7 0.013   NTclustered gi|2318761183|ref|XM_051214134.1| 6185 g5865 i0 100 0.0606694560669456 29 0 6 0 215 243 1089 1061 Schistosoma haematobium uncharacterized protein (MS3_00006035), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
9346943 9346943 PRJNA414036_P_NODE_56648_length_229_cov_2.969072_g54909_i0 PRJNA414036 56648 229 2.969072 6.79917488 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.02   NTclustered gi|690548685|emb|LN102200.1| 99802 g54909 i0 96.774 0.135371179039301 31 1 14 0 63 93 3548 3518 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0096665 blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
9346948 9346948 PRJNA414036_P_NODE_59148_length_220_cov_1.827027_g57409_i0 PRJNA414036 59148 220 1.827027 4.0194594 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.019   NTclustered gi|687163771|emb|LN041354.1| 99802 g57409 i0 100 0.127272727272727 28 0 13 0 59 86 6505 6478 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0040372 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
11897696 11897696 PRJNA414036_P_NODE_83550_length_157_cov_4.336066_g81811_i0 PRJNA414036 83550 157 4.336066 6.80762362 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.013   NTclustered gi|690856779|emb|LN356732.1| 99802 g81811 i0 100 0.178343949044586 28 0 18 0 23 50 564 591 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0126361 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;