RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA414036" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA414036 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7460791 7460791 PRJNA414036_P_NODE_20106_length_336_cov_178.009967_g18380_i0 PRJNA414036 20106 336 178.009967 598.11348912 Fungi 4751 Fungi Fungi 431 3.479999999999999e-116   NTclustered gi|387156428|emb|HE806161.1| 1229259 g18380 i0 89.941 100.535714285714 338 28 99 6 1 335 802 1136 Uncultured Chytridium partial 26S rRNA gene, clone EopYyyy3 blastn 33780 431 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae   uncultured Chytridium
22095104 22095104 PRJNA414036_P_NODE_21878_length_323_cov_790.416667_g20150_i0 PRJNA414036 21878 323 790.416667 2553.04583441 Neocallimastigales sp. 2588918 Fungi Fungi 124 6.34e-24   NTclustered gi|2247392096|gb|ON650586.1| 2588918 g20150 i0 85.124 3.28482972136223 121 18 37 0 16 136 362 242 Neocallimastigales sp. clone 38 i2 large subunit ribosomal RNA gene, partial sequence blastn 1061 124 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales     Neocallimastigales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;