RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA414036" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA414036 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3633769 3633769 PRJNA414036_P_NODE_40043_length_232_cov_5.852792_g38304_i0 PRJNA414036 40043 232 5.852792 13.57847744 Mastadenovirus 10509 Viruses Viruses 104 5.65e-18   NTclustered gi|2079660851|emb|OU501477.1| 28285 g38304 i0 93.056 29.4655172413793 72 3 31 2 156 226 11483 11553 Human adenovirus 5 isolate ADVJA-949-BE genome assembly, chromosome: ADVJA-949-BE blastn 6836 104 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
13836386 13836386 PRJNA414036_P_NODE_38871_length_236_cov_3.915423_g37132_i0 PRJNA414036 38871 236 3.915423 9.24039828 root 1 Root_unresolved Root_unresolved 78.7 3.49e-10   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g37132 i0 100 33.0127118644068 42 0 34 0 10 51 18297 18256 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 7791 78.7 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
21484582 21484582 PRJNA414036_P_NODE_25077_length_302_cov_5.662921_g23343_i0 PRJNA414036 25077 302 5.662921 17.10202142 root 1 Root_unresolved Root_unresolved 176 1.6e-39   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g23343 i0 100 82.4470198675497 95 0 83 0 98 192 14726 14820 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 24899 176 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
22759903 22759903 PRJNA414036_P_NODE_38558_length_237_cov_4.034653_g36819_i0 PRJNA414036 38558 237 4.034653 9.56212761 root 1 Root_unresolved Root_unresolved 106 1.61e-18   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g36819 i0 98.333 42.6751054852321 60 1 46 0 158 217 11314 11373 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 10114 106 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;