RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA408129" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA408129 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
418472 418472 PRJNA408129_S_NODE_31961_length_155_cov_2.779661_g31943_i0 PRJNA408129 31961 155 2.779661 4.30847455 Caudoviricetes sp. 2832643 Viruses Viruses 248 1.51e-61   NTclustered gi|2056752079|tpg|BK045336.1| 2832643 g31943 i0 97.26 3.74838709677419 146 4 94 0 3 148 10185 10040 MAG TPA_asm: Caudoviricetes sp. isolate ctn2L1, partial genome blastn 581 248 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
1082708 1082708 PRJNA408129_S_NODE_16601_length_189_cov_3.467105_g16583_i0 PRJNA408129 16601 189 3.467105 6.55282845 Skunavirus 1623305 Viruses Viruses 316 5.21e-82   NTclustered gi|380852483|gb|JQ740791.1| 1165138 g16583 i0 98.87 84.962962962963 177 2 94 0 13 189 28632 28808 Lactococcus Phage ASCC287, complete genome blastn 16058 316 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Skunavirus Skunavirus ASCC273
1693374 1693374 PRJNA408129_S_NODE_6202_length_252_cov_2.576744_g6184_i0 PRJNA408129 6202 252 2.576744 6.49339488 Caudoviricetes sp. 2832643 Viruses Viruses 353 5.59e-93   NTclustered gi|2915016823|gb|OR222530.1| 2832643 g6184 i0 92.032 4.88095238095238 251 20 99 0 2 252 62080 61830 MAG: Caudoviricetes sp. isolate MSP0407 genomic sequence blastn 1230 353 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
4245635 4245635 PRJNA408129_S_NODE_6664_length_247_cov_26822.442857_g6646_i0 PRJNA408129 6664 247 26822.442857 66251.43385679 Caudoviricetes sp. 2832643 Viruses Viruses 239 1.6e-58   NTclustered gi|2053082539|tpg|BK020126.1| 2832643 g6646 i0 93.21 29.0728744939271 162 11 66 0 76 237 21318 21157 MAG TPA_asm: Caudoviricetes sp. isolate ctENf1, partial genome blastn 7181 239 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5522126 5522126 PRJNA408129_S_NODE_15265_length_194_cov_4.974522_g15247_i0 PRJNA408129 15265 194 4.974522 9.65057268 Megaviridae environmental sample 1737588 Viruses Viruses 52.8 0.017   NTclustered gi|1758106386|gb|MN448274.1| 1737588 g15247 i0 100 0.144329896907216 28 0 14 0 44 71 48530 48503 MAG: Megaviridae environmental sample isolate oPacV-662 clone oPacV-662_c2 blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Megaviridae environmental sample
6796176 6796176 PRJNA408129_S_NODE_23946_length_169_cov_2.992424_g23928_i0 PRJNA408129 23946 169 2.992424 5.05719656 Erysiphe necator associated ourmia-like virus 68 2741848 Viruses Viruses 76.8 8.37e-10   NTclustered gi|1848976669|gb|MN611596.1| 2741848 g23928 i0 95.745 6.92307692307692 47 2 28 0 123 169 3344 3390 Erysiphe necator associated ourmia-like virus 68 isolate PMS2_204, complete genome blastn 1170 76.8 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Ourmiavirus Erysiphe necator associated ourmia-like virus 68
8071688 8071688 PRJNA408129_S_NODE_22547_length_172_cov_3.688889_g22529_i0 PRJNA408129 22547 172 3.688889 6.34488908 Caudoviricetes sp. 2832643 Viruses Viruses 268 1.32e-67   NTclustered gi|2052993197|tpg|BK030876.1| 2832643 g22529 i0 94.767 4.51744186046512 172 9 100 0 1 172 2179 2350 MAG TPA_asm: Caudoviricetes sp. isolate cttT65, partial genome blastn 777 268 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
8071791 8071791 PRJNA408129_S_NODE_35307_length_151_cov_1.403509_g35289_i0 PRJNA408129 35307 151 1.403509 2.11929859 Caudoviricetes sp. 2832643 Viruses Viruses 259 6.76e-65   NTclustered gi|2053082539|tpg|BK020126.1| 2832643 g35289 i0 99.306 20.1192052980132 144 0 95 1 1 143 692 835 MAG TPA_asm: Caudoviricetes sp. isolate ctENf1, partial genome blastn 3038 259 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
9346446 9346446 PRJNA408129_S_NODE_14608_length_197_cov_3.081250_g14590_i0 PRJNA408129 14608 197 3.08125 6.0700625 Erysiphe necator associated deltaflexivirus 4 2743097 Viruses Viruses 289 1.1899999999999998e-73   NTclustered gi|2288523299|gb|ON811606.1| 2743097 g14590 i0 95.556 5.41116751269035 180 8 91 0 18 197 6765 6944 MAG: Erysiphe necator associated deltaflexivirus 4 isolate TIGMIC_2, complete genome blastn 1066 289 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Erysiphe necator associated deltaflexivirus 4
10622291 10622291 PRJNA408129_S_NODE_20709_length_177_cov_2.100000_g20691_i0 PRJNA408129 20709 177 2.1 3.717 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.015   NTclustered gi|2053007875|tpg|BK016974.1| 2832643 g20691 i0 100 0.15819209039548 28 0 16 0 75 102 32842 32815 MAG TPA_asm: Caudoviricetes sp. isolate ctPIy6, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10622395 10622395 PRJNA408129_S_NODE_34989_length_151_cov_3.000000_g34971_i0 PRJNA408129 34989 151 3 4.53 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.012   NTclustered gi|2057990036|tpg|BK046922.1| 2832643 g34971 i0 100 0.185430463576159 28 0 19 0 114 141 15647 15674 MAG TPA_asm: Caudoviricetes sp. isolate ct1Y43, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10622450 10622450 PRJNA408129_S_NODE_7569_length_239_cov_9.445545_g7551_i0 PRJNA408129 7569 239 9.445545 22.57485255 Chrocagost virus 3129398 Viruses Viruses 302 1.9300000000000002e-77   NTclustered gi|2717317482|gb|PP171846.1| 3129398 g7551 i0 92.453 183.874476987448 212 15 88 1 14 224 5859 5648 MAG: Chrocagost virus isolate CC1A_k141_84256 genomic sequence blastn 43946 302 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagost virus
13172236 13172236 PRJNA408129_S_NODE_33551_length_153_cov_2.336207_g33533_i0 PRJNA408129 33551 153 2.336207 3.57439671 Alphapithovirus sibericum 3426242 Viruses Viruses 233 4.17e-57   NTclustered gi|585299329|ref|NC_023423.1| 1450746 g33533 i0 99.225 1.68627450980392 129 1 84 0 25 153 298932 298804 Pithovirus sibericum isolate P1084-T, complete genome blastn 258 233 1 Viruses Pithoviruses           Alphapithovirus Alphapithovirus sibericum
14447247 14447247 PRJNA408129_S_NODE_15532_length_193_cov_4.153846_g15514_i0 PRJNA408129 15532 193 4.153846 8.01692278 Erysiphe necator associated deltaflexivirus 4 2743097 Viruses Viruses 318 1.4899999999999995e-82   NTclustered gi|2288523299|gb|ON811606.1| 2743097 g15514 i0 97.838 0.958549222797927 185 3 96 1 9 193 7113 6930 MAG: Erysiphe necator associated deltaflexivirus 4 isolate TIGMIC_2, complete genome blastn 185 318 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Erysiphe necator associated deltaflexivirus 4
14447444 14447444 PRJNA408129_S_NODE_6592_length_248_cov_4.876777_g6574_i0 PRJNA408129 6592 248 4.876777 12.09440696 Caudoviricetes sp. 2832643 Viruses Viruses 75 4.79e-9   NTclustered gi|2057119952|tpg|BK057938.1| 2832643 g6574 i0 95.745 5.13709677419355 47 1 19 1 57 102 16590 16544 MAG TPA_asm: Caudoviricetes sp. isolate ctl8Q6, partial genome blastn 1274 75 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
16385143 16385143 PRJNA408129_S_NODE_23993_length_169_cov_2.507576_g23975_i0 PRJNA408129 23993 169 2.507576 4.23780344 Skunavirus 1623305 Viruses Viruses 198 1.7099999999999997e-46   NTclustered gi|566001680|gb|KF676640.1| 1414741 g23975 i0 94.531 97.9408284023669 128 7 76 0 1 128 19375 19502 Lactococcus phage SK1833, complete genome blastn 16552 198 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Skunavirus Skunavirus sk1
16995827 16995827 PRJNA408129_S_NODE_19634_length_180_cov_1.860140_g19616_i0 PRJNA408129 19634 180 1.86014 3.348252 Theiavirus salishense 3060737 Viruses Viruses 65.8 1.96e-6   NTclustered gi|2500354595|ref|NC_075036.1| 2024608 g19616 i0 97.368 1.76111111111111 38 1 21 0 17 54 235766 235729 Bodo saltans virus strain NG1, complete genome blastn 317 65.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Theiavirus Theiavirus salishense
16995837 16995837 PRJNA408129_S_NODE_20914_length_176_cov_4.244604_g20896_i0 PRJNA408129 20914 176 4.244604 7.47050304 Bacteriophage sp. 38018 Viruses Viruses 278 2.25e-70   NTclustered gi|2294099936|gb|OP073128.1| 38018 g20896 i0 98.718 0.886363636363636 156 2 89 0 10 165 39237 39392 MAG: Bacteriophage sp. isolate 0275_13708, partial genome blastn 156 278 1 Viruses               Bacteriophage sp.
16996004 16996004 PRJNA408129_S_NODE_7194_length_242_cov_27978.843902_g7176_i0 PRJNA408129 7194 242 27978.843902 67708.80224284 Caudoviricetes sp. 2832643 Viruses Viruses 243 1.2100000000000004e-59   NTclustered gi|2914988762|gb|OR222153.1| 2832643 g7176 i0 96 30.7644628099174 150 4 62 2 85 234 13754 13901 MAG: Caudoviricetes sp. isolate MSP0823 genomic sequence blastn 7445 243 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
16996038 16996038 PRJNA408129_S_NODE_9914_length_222_cov_3.572973_g9896_i0 PRJNA408129 9914 222 3.572973 7.93200006 uncultured human fecal virus 239364 Viruses Viruses 176 1.12e-39   NTclustered gi|1569729248|gb|MK233574.1| 239364 g9896 i0 98.02 0.675675675675676 101 2 68 0 122 222 939 839 Uncultured human fecal virus clone KLE1615.sp1_S11.L11_2_c1 sequence blastn 150 176 1 Viruses               uncultured human fecal virus
18270061 18270061 PRJNA408129_S_NODE_26875_length_163_cov_4.182540_g26857_i0 PRJNA408129 26875 163 4.18254 6.8175402 Skunavirus P1532 2845432 Viruses Viruses 220 3.52e-53   NTclustered gi|1864379644|ref|NC_049474.1| 2662296 g26857 i0 91.358 1.77914110429448 162 13 99 1 3 163 20800 20961 Lactococcus phage P1532, complete genome blastn 290 220 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Skunavirus Skunavirus P1532
18270107 18270107 PRJNA408129_S_NODE_33875_length_152_cov_11.208696_g33857_i0 PRJNA408129 33875 152 11.208696 17.03721792 Tobamovirus tabaci 3432891 Viruses Viruses 265 1.47e-66   NTclustered gi|2813525801|dbj|LC846392.1| 12242 g33857 i0 100 94.0723684210526 143 0 94 0 10 152 3663 3805 Tobacco mosaic virus TMV-Du-CNU1 genomic RNA, complete genome blastn 14299 265 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
18270162 18270162 PRJNA408129_S_NODE_6235_length_251_cov_17.948598_g6217_i0 PRJNA408129 6235 251 17.948598 45.05098098 uncultured human fecal virus 239364 Viruses Viruses 427 3.2299999999999993e-115   NTclustered gi|1569729248|gb|MK233574.1| 239364 g6217 i0 98.354 0.968127490039841 243 4 97 0 9 251 851 609 Uncultured human fecal virus clone KLE1615.sp1_S11.L11_2_c1 sequence blastn 243 427 1 Viruses               uncultured human fecal virus
19544350 19544350 PRJNA408129_S_NODE_5176_length_265_cov_1.535088_g5158_i0 PRJNA408129 5176 265 1.535088 4.0679832 Caudoviricetes sp. 2832643 Viruses Viruses 298 2.82e-76   NTclustered gi|2056875428|tpg|BK044767.1| 2832643 g5158 i0 95.699 2.09056603773585 186 7 70 1 80 265 39075 39259 MAG TPA_asm: Caudoviricetes sp. isolate ctNWc13, partial genome blastn 554 298 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
20820198 20820198 PRJNA408129_S_NODE_4617_length_273_cov_3.432203_g4599_i0 PRJNA408129 4617 273 3.432203 9.36991419 Skokie dicistro-like virus 2789443 Viruses Viruses 409 1.29e-109   NTclustered gi|1935607033|gb|MT747992.1| 2789443 g4599 i0 94.361 1.77289377289377 266 15 97 0 1 266 8677 8412 Skokie dicistro-like virus strain USAdf-2 polyprotein 1 and polyprotein 2 genes, complete cds blastn 484 409 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
21484434 21484434 PRJNA408129_S_NODE_22297_length_173_cov_2.036765_g22279_i0 PRJNA408129 22297 173 2.036765 3.52360345 root 1 Root_unresolved Root_unresolved 215 1.75e-51   NTclustered gi|2915026475|gb|OR222618.1| 2832643 g22279 i0 91.195 56.6011560693642 159 12 91 2 16 173 82109 82266 MAG: Caudoviricetes sp. isolate MSP0313 genomic sequence blastn 9792 215 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
22094751 22094751 PRJNA408129_S_NODE_1478_length_355_cov_4.962264_g1460_i0 PRJNA408129 1478 355 4.962264 17.6160372 Triticum polonicum deltaflexivirus 1 2794417 Viruses Viruses 531 3.5399999999999993e-146   NTclustered gi|1950492753|gb|MW328746.1| 2794417 g1460 i0 94.509 7.29577464788732 346 15 97 4 13 355 8103 7759 Triticum polonicum deltaflexivirus 1 RdRp, HP2, HP3, and HP4 genes, complete cds blastn 2590 531 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Triticum polonicum deltaflexivirus 1
22094935 22094935 PRJNA408129_S_NODE_4358_length_277_cov_9.512500_g4340_i0 PRJNA408129 4358 277 9.5125 26.349625 Potexvirus pepini 3433856 Viruses Viruses 510 3.5e-140   NTclustered gi|375808845|gb|JN835466.1| 112229 g4340 i0 100 95.2274368231047 276 0 99 0 1 276 6412 6137 Pepino mosaic virus strain CH2, complete genome blastn 26378 510 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
23370449 23370449 PRJNA408129_S_NODE_20459_length_177_cov_7.435714_g20441_i0 PRJNA408129 20459 177 7.435714 13.16121378 Pahexavirus PHL092M00 1982282 Viruses Viruses 283 4.87e-72   NTclustered gi|849255443|ref|NC_027385.1| 1500813 g20441 i0 97.024 93.8587570621469 168 5 95 0 8 175 15755 15922 Propionibacterium phage PHL092M00, complete genome blastn 16613 283 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pahexavirus Pahexavirus PHL092M00
23370536 23370536 PRJNA408129_S_NODE_28199_length_161_cov_2.564516_g28181_i0 PRJNA408129 28199 161 2.564516 4.12887076 Caudoviricetes sp. 2832643 Viruses Viruses 176 7.609999999999999e-40   NTclustered gi|2915004160|gb|OR222349.1| 2832643 g28181 i0 98.98 0.608695652173913 98 1 61 0 1 98 12844 12941 MAG: Caudoviricetes sp. isolate MSP1049 genomic sequence blastn 98 176 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;