RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA408129" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA408129 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2969052 2969052 PRJNA408129_S_NODE_11883_length_210_cov_7.838150_g11865_i0 PRJNA408129 11883 210 7.83815 16.460115 Kickxella alabastrina 61397 Fungi Fungi 63.9 8.51e-6   NTclustered gi|2323999038|ref|XM_051537928.1| 61397 g11865 i0 97.297 0.176190476190476 37 1 18 0 136 172 297 261 Kickxella alabastrina uncharacterized protein (BX661DRAFT_195271), partial mRNA blastn 37 63.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
8071706 8071706 PRJNA408129_S_NODE_24447_length_168_cov_2.793893_g24429_i0 PRJNA408129 24447 168 2.793893 4.69374024 Pandora neoaphidis 76017 Fungi Fungi 307 2.73e-79   NTclustered gi|302032770|gb|GU132784.1| 76017 g24429 i0 100 96.1547619047619 166 0 99 0 3 168 421 256 Pandora neoaphidis isolate ARSEF 1985 large subunit ribosomal RNA gene, partial sequence blastn 16154 307 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Pandora Pandora neoaphidis
18269949 18269949 PRJNA408129_S_NODE_14295_length_198_cov_6.527950_g14277_i0 PRJNA408129 14295 198 6.52795 12.925341 Piptocephalis corymbifera 78917 Fungi Fungi 71.3 4.74e-8   NTclustered gi|311235601|ref|NG_027616.1| 78917 g14277 i0 88.333 0.954545454545455 60 6 30 1 106 164 3234 3175 Piptocephalis corymbifera NRRL 2385 28S rRNA gene, partial sequence; from reference material blastn 189 71.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Piptocephalis Piptocephalis corymbifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;