RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA408129" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA408129 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5522331 5522331 PRJNA408129_S_NODE_5165_length_265_cov_2.210526_g5147_i0 PRJNA408129 5165 265 2.210526 5.8578939 Helobdella robusta 6412 Annelida Annelida 60.2 1.45e-4   NTclustered gi|675865245|ref|XM_009019935.1| 6412 g5147 i0 100 0.120754716981132 32 0 12 0 202 233 1090 1059 Helobdella robusta hypothetical protein partial mRNA blastn 32 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
11897407 11897407 PRJNA408129_S_NODE_7730_length_238_cov_4.054726_g7712_i0 PRJNA408129 7730 238 4.054726 9.65024788 Ailoscolex lacteospumosus 1046305 Annelida Annelida 52.8 0.021   NTclustered gi|2920003545|emb|OZ238868.1| 1046305 g7712 i0 100 0.117647058823529 28 0 12 0 163 190 10195107 10195080 Ailoscolex lacteospumosus genome assembly, chromosome: 9 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
13172149 13172149 PRJNA408129_S_NODE_24051_length_169_cov_2.151515_g24033_i0 PRJNA408129 24051 169 2.151515 3.63606035 Siboglinum plumosum 3080496 Annelida Annelida 63.9 6.52e-6   NTclustered gi|2627901219|ref|NC_084115.1| 3080496 g24033 i0 100 8.21301775147929 34 0 20 0 134 167 5628 5661 Siboglinum plumosum mitochondrion, complete genome blastn 1388 63.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Siboglinum Siboglinum plumosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;