contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA408129" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 418269 | 418269 | PRJNA408129_S_NODE_10161_length_220_cov_13.453552_g10143_i0 | PRJNA408129 | 10161 | 220 | 13.453552 | 29.5978144 | Sneathia sanguinegens | 40543 | Bacteria | Bacteria | 285 | 1.7599999999999998e-72 | NTclustered | gi|2769805188|gb|CP160095.1| | 40543 | g10143 | i0 | 93.299 | 495.745454545455 | 194 | 12 | 88 | 1 | 14 | 206 | 1969 | 1776 | Sneathia sanguinegens strain CCUG 41628T chromosome, complete genome | blastn | 109064 | 285 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia sanguinegens | ||
| 2969159 | 2969159 | PRJNA408129_S_NODE_24883_length_167_cov_2.938462_g24865_i0 | PRJNA408129 | 24883 | 167 | 2.938462 | 4.90723154 | Leptotrichia sp. oral taxon 498 | 712368 | Bacteria | Bacteria | 292 | 7.58e-75 | NTclustered | gi|1227268105|gb|CP016753.1| | 712368 | g24865 | i0 | 98.78 | 281.119760479042 | 164 | 2 | 98 | 0 | 4 | 167 | 594226 | 594063 | Leptotrichia sp. oral taxon 498, complete genome | blastn | 46947 | 292 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 498 | ||
| 6796320 | 6796320 | PRJNA408129_S_NODE_6826_length_246_cov_2.904306_g6808_i0 | PRJNA408129 | 6826 | 246 | 2.904306 | 7.14459276 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 344 | 3.27e-90 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g6808 | i0 | 97.059 | 365.406504065041 | 204 | 6 | 84 | 0 | 36 | 239 | 52137 | 51934 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 89890 | 344 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 7460719 | 7460719 | PRJNA408129_S_NODE_9526_length_224_cov_14.406417_g9508_i0 | PRJNA408129 | 9526 | 224 | 14.406417 | 32.27037408 | Fusobacterium | 848 | Bacteria | Bacteria | 309 | 1.07e-79 | NTclustered | gi|2705042081|gb|CP085192.1| | 856 | g9508 | i0 | 95.361 | 410.508928571429 | 194 | 9 | 87 | 0 | 17 | 210 | 155797 | 155604 | Fusobacterium varium strain SB069 chromosome | blastn | 91954 | 309 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 11286013 | 11286013 | PRJNA408129_S_NODE_14449_length_198_cov_2.037267_g14431_i0 | PRJNA408129 | 14449 | 198 | 2.037267 | 4.03378866 | Leptotrichia | 32067 | Bacteria | Bacteria | 366 | 5.4e-97 | NTclustered | gi|1227268105|gb|CP016753.1| | 712368 | g14431 | i0 | 100 | 10.0454545454545 | 198 | 0 | 100 | 0 | 1 | 198 | 1525475 | 1525278 | Leptotrichia sp. oral taxon 498, complete genome | blastn | 1989 | 366 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 498 | ||
| 13836211 | 13836211 | PRJNA408129_S_NODE_25811_length_165_cov_3.359375_g25793_i0 | PRJNA408129 | 25811 | 165 | 3.359375 | 5.54296875 | Fusobacterium | 848 | Bacteria | Bacteria | 243 | 7.63e-60 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g25793 | i0 | 100 | 17.3454545454545 | 131 | 0 | 98 | 0 | 4 | 134 | 2320896 | 2320766 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 2862 | 243 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 20208907 | 20208907 | PRJNA408129_S_NODE_25836_length_165_cov_3.054688_g25818_i0 | PRJNA408129 | 25836 | 165 | 3.054688 | 5.0402352 | Fusobacterium | 848 | Bacteria | Bacteria | 268 | 1.26e-67 | NTclustered | gi|2269773925|gb|CP100429.1| | 76857 | g25818 | i0 | 100 | 26.3636363636364 | 145 | 0 | 88 | 0 | 12 | 156 | 2137785 | 2137641 | Fusobacterium polymorphum strain SSMR1 chromosome, complete genome | blastn | 4350 | 268 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 21484428 | 21484428 | PRJNA408129_S_NODE_21237_length_175_cov_5.137681_g21219_i0 | PRJNA408129 | 21237 | 175 | 5.137681 | 8.99094175 | Fusobacterium | 848 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|2445153921|gb|CP117797.1| | 851 | g21219 | i0 | 100 | 3.2 | 28 | 0 | 16 | 0 | 34 | 61 | 892102 | 892129 | Fusobacterium nucleatum strain FNA chromosome, complete genome | blastn | 560 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 24644706 | 24644706 | PRJNA408129_S_NODE_14640_length_197_cov_2.562500_g14622_i0 | PRJNA408129 | 14640 | 197 | 2.5625 | 5.048125 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 359 | 8.98e-95 | NTclustered | gi|1708575239|dbj|AP019834.1| | 157687 | g14622 | i0 | 100 | 7.82741116751269 | 194 | 0 | 98 | 0 | 4 | 197 | 1853694 | 1853501 | Leptotrichia wadei JMUB3933 DNA, complete genome | blastn | 1542 | 359 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 24644790 | 24644790 | PRJNA408129_S_NODE_23720_length_169_cov_10.568182_g23702_i0 | PRJNA408129 | 23720 | 169 | 10.568182 | 17.86022758 | Fusobacterium perfoetens | 852 | Bacteria | Bacteria | 233 | 4.7e-57 | NTclustered | gi|13447141|gb|AF342857.1| | 852 | g23702 | i0 | 93.168 | 415.970414201183 | 161 | 8 | 93 | 3 | 1 | 158 | 461 | 301 | Fusobacterium perfoetens strain ATCC 29250 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 70299 | 233 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium perfoetens |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;