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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA408129" and tax_clade = "Sar"

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tax_phylum 4

tax_superkingdom 1

tax_clade 1

  • Sar · 23 ✖

bioproject 1

  • PRJNA408129 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
418279 418279 PRJNA408129_S_NODE_11161_length_214_cov_29.361582_g11143_i0 PRJNA408129 11161 214 29.361582 62.83378548 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 211 2.94e-50   NTclustered gi|1378171755|ref|XM_024720355.1| 4781 g11143 i0 93.056 2.27102803738318 144 10 67 0 46 189 477 334 Plasmopara halstedii CRN-like protein (PHALS_06969), partial mRNA blastn 486 211 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
418439 418439 PRJNA408129_S_NODE_2761_length_310_cov_11.073260_g2743_i0 PRJNA408129 2761 310 11.07326 34.327106 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.73e-4   NTclustered gi|921131233|ref|XM_013584698.1| 51315 g2743 i0 97.143 0.112903225806452 35 1 11 0 115 149 1443 1477 Eimeria necatrix hypothetical protein, conserved partial mRNA blastn 35 60.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
1082700 1082700 PRJNA408129_S_NODE_13821_length_200_cov_14.601227_g13803_i0 PRJNA408129 13821 200 14.601227 29.202454 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 342 9.209999999999999e-90   NTclustered gi|2792507|gb|AF042107.1| 5802 g13803 i0 98.958 91.385 192 1 96 1 1 191 847 656 Eimeria tenella ribosomal protein S3a mRNA, complete cds blastn 18277 342 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
1082736 1082736 PRJNA408129_S_NODE_34741_length_151_cov_5.491228_g34723_i0 PRJNA408129 34741 151 5.4912280000000004 8.29175428 Oxytricha 5943 SAR_Eukaryotes SAR_Eukaryotes 244 1.89e-60   NTclustered gi|1859609462|gb|MT640772.1| 305490 g34723 i0 97.872 93.3774834437086 141 3 93 0 11 151 11 151 Uncultured Hypotrichia clone OTU55.1 large subunit ribosomal RNA gene, partial sequence blastn 14100 244 1 Eukaryota Sar   Ciliophora Spirotrichea       uncultured Hypotrichia
1082755 1082755 PRJNA408129_S_NODE_761_length_408_cov_13.568733_g743_i0 PRJNA408129 761 408 13.568733 55.36043064 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 610 5.15e-170   NTclustered gi|2651589115|gb|PP108238.1| 4785 g743 i0 97.479 91.031862745098 357 9 88 0 22 378 23130 22774 Phytophthora cinnamomi strain CT09CHAP1 mitochondrion, complete genome blastn 37141 616 0.99025974025974 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
2969105 2969105 PRJNA408129_S_NODE_18363_length_183_cov_5.513699_g18345_i0 PRJNA408129 18363 183 5.513699 10.09006917 Ciliophrys infusionum 38824 SAR_Eukaryotes SAR_Eukaryotes 65.8 2e-6   NTclustered gi|612134634|dbj|AB846664.1| 38824 g18345 i0 97.368 19.7049180327869 38 1 21 0 146 183 8063 8100 Ciliophrys infusionum DNA, ubiquitin specific peptidase 39, ubiquitin conjugating enzyme 12, pseudogenes of 18S ribosomal RNA, 5.8S ribosomal RNA, 28S ribosomal RNA, strain: YPF1207 blastn 3606 65.8 1 Eukaryota Sar     Dictyochophyceae Rhizochromulinales Ciliophryaceae Ciliophrys Ciliophrys infusionum
3633630 3633630 PRJNA408129_S_NODE_35783_length_150_cov_3.000000_g35765_i0 PRJNA408129 35783 150 3 4.5 Lotharella 74819 SAR_Eukaryotes SAR_Eukaryotes 99 1.55e-16   NTclustered gi|220983373|dbj|AB453009.1| 74820 g35765 i0 81.452 30.9266666666667 124 20 81 3 15 136 3098 2976 Lotharella vacuolata gene for nuclear large subunit ribosomal RNA, partial sequence blastn 4639 99 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Lotharella Lotharella vacuolata
5522169 5522169 PRJNA408129_S_NODE_19265_length_181_cov_1.798611_g19247_i0 PRJNA408129 19265 181 1.798611 3.25548591 Heterosigma akashiwo 2829 SAR_Eukaryotes SAR_Eukaryotes 200 5.19e-47   NTclustered gi|189095288|ref|NC_010772.1| 2829 g19247 i0 87.791 124.314917127072 172 20 94 1 11 181 3425 3596 Heterosigma akashiwo chloroplast, complete genome blastn 22501 200 1 Eukaryota Sar     Raphidophyceae Chattonellales Chattonellaceae Heterosigma Heterosigma akashiwo
6796211 6796211 PRJNA408129_S_NODE_2746_length_311_cov_3.791971_g2728_i0 PRJNA408129 2746 311 3.791971 11.79302981 Sterkiella histriomuscorum 94289 SAR_Eukaryotes SAR_Eukaryotes 122 2.1799999999999999e-23   NTclustered gi|47176510|gb|AY618090.1| 94289 g2728 i0 88.889 12.1736334405145 99 11 32 0 24 122 385 287 Sterkiella histriomuscorum clone UGC1O0004_I02_R genomic sequence blastn 3786 122 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella histriomuscorum
8071664 8071664 PRJNA408129_S_NODE_20047_length_179_cov_1.091549_g20029_i0 PRJNA408129 20047 179 1.091549 1.95387271 Bremia lactucae 4779 SAR_Eukaryotes SAR_Eukaryotes 71.3 4.19e-8   NTclustered gi|2794739894|ref|XM_067964161.1| 4779 g20029 i0 85.294 0.379888268156425 68 10 38 0 110 177 449 382 Bremia lactucae uncharacterized protein (CCR75_006089), partial mRNA blastn 68 71.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
11286077 11286077 PRJNA408129_S_NODE_6229_length_251_cov_43.733645_g6211_i0 PRJNA408129 6229 251 43.733645 109.77144895 root 1 Root_unresolved Root_unresolved 388 1.5299999999999998e-103   NTclustered gi|10832|emb|X54512.1| 5911 g6211 i0 99.078 77.2231075697211 217 1 86 1 28 243 8330 8114 T. thermophila rdn A+ gene for pre-RNA, 17S rRNA, 5.8S rRNA, 26S rRNA blastn 19383 388 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
11897160 11897160 PRJNA408129_S_NODE_10550_length_218_cov_4.348066_g10532_i0 PRJNA408129 10550 218 4.348066 9.47878388 Platyophryides magnus 1003332 SAR_Eukaryotes SAR_Eukaryotes 337 4.7499999999999994e-88   NTclustered gi|328684914|gb|HM122030.1| 1003332 g10532 i0 94.954 98.8348623853211 218 6 99 5 3 218 49 263 Platyophryides magnus isolate SNK09112401 macronuclear blastn 21546 337 1 Eukaryota Sar   Ciliophora Colpodea Cyrtolophosidida Platyophryidae Platyophryides Platyophryides magnus
11897192 11897192 PRJNA408129_S_NODE_14210_length_199_cov_2.320988_g14192_i0 PRJNA408129 14210 199 2.320988 4.61876612 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 161 2.75e-35   NTclustered gi|673051696|ref|XM_008881587.1| 157072 g14192 i0 86.486 17.0050251256281 148 18 74 2 52 198 615 469 Aphanomyces invadans 40S ribosomal protein mRNA blastn 3384 161 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
13172244 13172244 PRJNA408129_S_NODE_3471_length_293_cov_21794.503906_g3453_i0 PRJNA408129 3471 293 21794.503906 63857.89644458 Pythium monospermum 92964 SAR_Eukaryotes SAR_Eukaryotes 337 6.699999999999997e-88   NTclustered gi|33520250|gb|AY273995.1| 92964 g3453 i0 97.475 29.3617747440273 198 4 67 1 13 209 511 708 Pythium monospermum large subunit ribosomal RNA gene, partial sequence blastn 8603 337 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium monospermum
14447467 14447467 PRJNA408129_S_NODE_8332_length_233_cov_4.168367_g8314_i0 PRJNA408129 8332 233 4.168367 9.71229511 Paramecium polycaryum 109354 SAR_Eukaryotes SAR_Eukaryotes 374 3.9199999999999994e-99   NTclustered gi|1409630804|gb|MG953266.1| 109354 g8314 i0 98.14 90.2231759656652 215 2 91 1 15 227 586 800 Paramecium polycaryum isolate ChY12-6 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21022 374 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium polycaryum
15721235 15721235 PRJNA408129_S_NODE_6593_length_248_cov_4.815166_g6575_i0 PRJNA408129 6593 248 4.815166 11.94161168 Globisporangium ultimum 2052682 SAR_Eukaryotes SAR_Eukaryotes 412 8.93e-111   NTclustered gi|299830435|ref|NC_014280.1| 2052682 g6575 i0 97.908 100.379032258065 239 4 96 1 1 239 9213 9450 Pythium ultimum mitochondrion, complete genome blastn 24894 412 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium ultimum
16995924 16995924 PRJNA408129_S_NODE_3034_length_303_cov_29.409774_g3016_i0 PRJNA408129 3034 303 29.409774 89.11161522 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 425 1.44e-114   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g3016 i0 94.565 8.42904290429043 276 13 91 2 17 291 362 88 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 2554 425 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
17660313 17660313 PRJNA408129_S_NODE_32414_length_154_cov_9.333333_g32396_i0 PRJNA408129 32414 154 9.333333 14.37333282 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 274 2.48e-69   NTclustered gi|1837628855|gb|MN158348.1| 5909 g32396 i0 98.701 97.8701298701299 154 2 100 0 1 154 2782 2935 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 15072 274 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
18270176 18270176 PRJNA408129_S_NODE_7795_length_237_cov_19.615000_g7777_i0 PRJNA408129 7795 237 19.615 46.48755 uncultured stramenopile 152704 SAR_Eukaryotes SAR_Eukaryotes 104 5.79e-18   NTclustered gi|316990812|gb|HQ222507.1| 152704 g7777 i0 77.841 7.07172995780591 176 34 73 5 16 188 405 232 Uncultured stramenopile clone AN0680S06 18S ribosomal RNA gene, partial sequence blastn 1676 104 1 Eukaryota Sar             uncultured stramenopile
20208892 20208892 PRJNA408129_S_NODE_1996_length_333_cov_70.577703_g1978_i0 PRJNA408129 1996 333 70.577703 235.02375099 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 542 1.53e-149   NTclustered gi|440919553|gb|JX436353.1| 1279233 g1978 i0 98.071 92.981981981982 311 6 93 0 20 330 33 343 Myzocytiopsis sp. GPR-2013 28S ribosomal RNA gene, partial sequence blastn 30963 542 1 Eukaryota Sar   Oomycota   Myzocytiopsidales Myzocytiopsidaceae Myzocytiopsis Myzocytiopsis sp. GPR-2013
22094859 22094859 PRJNA408129_S_NODE_27658_length_162_cov_2.232000_g27640_i0 PRJNA408129 27658 162 2.232 3.61584 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 65.8 1.73e-6   NTclustered gi|673042468|ref|XM_008876973.1| 157072 g27640 i0 97.368 0.234567901234568 38 1 23 0 2 39 653 690 Aphanomyces invadans hypothetical protein mRNA blastn 38 65.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
22759734 22759734 PRJNA408129_S_NODE_27958_length_161_cov_5.766129_g27940_i0 PRJNA408129 27958 161 5.766129 9.28346769 root 1 Root_unresolved Root_unresolved 235 1.24e-57   NTclustered gi|833494852|ref|XM_012915026.1| 5866 g27940 i0 96.503 133.540372670807 143 3 89 2 5 147 46 186 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 21500 235 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
25308892 25308892 PRJNA408129_S_NODE_22820_length_171_cov_50.328358_g22802_i0 PRJNA408129 22820 171 50.328358 86.06149218 Lagenidium 4802 SAR_Eukaryotes SAR_Eukaryotes 278 2.17e-70   NTclustered gi|319769386|gb|HQ343198.1| 884622 g22802 i0 99.346 89.9181286549708 153 1 89 0 15 167 544 696 Lagenidium sp. PWL-2010f strain CBS 127284 18S ribosomal RNA gene, partial sequence blastn 15376 278 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium sp. PWL-2010f

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;