RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA407886" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA407886 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6794432 6794432 PRJNA407886_P_NODE_11146_length_908_cov_24.532934_g9783_i0 PRJNA407886 11146 908 24.532934 222.75904072 Sycon ciliatum 27933 Porifera other_Eukaryota 56.5 0.007   NTclustered gi|2732931031|ref|XM_065332585.1| 27933 g9783 i0 100 0.0330396475770925 30 0 3 0 496 525 919 890 PREDICTED: Sycon ciliatum mucin-2-like (LOC135819385), transcript variant X1, mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
13171778 13171778 PRJNA407886_P_NODE_73831_length_248_cov_0.862857_g72137_i0 PRJNA407886 73831 248 0.862857 2.13988536 Sycon ciliatum 27933 Porifera other_Eukaryota 241 4.46e-59   NTclustered gi|2732923348|ref|XM_065328593.1| 27933 g72137 i0 84.553 96.75 246 35 99 1 2 247 1083 1325 PREDICTED: Sycon ciliatum heat shock cognate 71 kDa protein (LOC135815317), mRNA blastn 23994 241 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;