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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA407886" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA407886 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
417484 417484 PRJNA407886_P_NODE_47221_length_314_cov_2.556017_g45527_i0 PRJNA407886 47221 314 2.556017 8.02589338 Amorphochlora amoebiformis 1561963 SAR_Eukaryotes SAR_Eukaryotes 102 2.88e-17   NTclustered gi|226427122|gb|FJ209028.1| 1561963 g45527 i0 84.404 3.47452229299363 109 12 34 5 207 313 893 788 Lotharella amoeboformis calreticulin mRNA, complete cds blastn 1091 102 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Amorphochlora Amorphochlora amoebiformis
417835 417835 PRJNA407886_P_NODE_64141_length_263_cov_3.242105_g62447_i0 PRJNA407886 64141 263 3.242105 8.52673615 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 457 4.35e-124   NTclustered gi|48727795|gb|AY620285.1| 175275 g62447 i0 98.099 98.509505703422107 263 4 100 1 1 263 104 365 Uncultured cercozoan clone 4-5.2 small subunit ribosomal RNA gene, partial sequence blastn 25908 457 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
4910216 4910216 PRJNA407886_P_NODE_42644_length_333_cov_2.615385_g40950_i0 PRJNA407886 42644 333 2.615385 8.70923205 Paulinella 39716 SAR_Eukaryotes SAR_Eukaryotes 355 2.14e-93   NTclustered gi|224549833|gb|FJ456915.1| 39717 g40950 i0 86.916 93.5075075075075 321 36 95 5 16 333 841 524 Paulinella chromatophora strain FK01 actin gene, partial cds blastn 31138 357 0.994397759103641 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
5520615 5520615 PRJNA407886_P_NODE_14465_length_740_cov_2.287856_g12890_i0 PRJNA407886 14465 740 2.287856 16.9301344 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 808 0   NTclustered gi|238617666|gb|FJ973412.1| 188950 g12890 i0 86.926 98.8972972972973 719 94 97 0 2 720 719 1 Bodomorpha minima strain ATCC 50339 alpha-tubulin (atub) gene, partial cds blastn 73184 808 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
7460599 7460599 PRJNA407886_P_NODE_84106_length_208_cov_4.340741_g82412_i0 PRJNA407886 84106 208 4.340741 9.02874128 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 89.8 1.39e-13   NTclustered gi|220983376|dbj|AB453012.1| 552662 g82412 i0 100 24.3317307692308 48 0 23 0 161 208 2311 2358 Cercozoa sp. YPF501 gene for nuclear large subunit ribosomal RNA, partial sequence blastn 5061 89.8 1 Eukaryota Sar   Cercozoa         Cercozoa sp. YPF501
8070620 8070620 PRJNA407886_P_NODE_38527_length_354_cov_5.042705_g36833_i0 PRJNA407886 38527 354 5.042705 17.8511757 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 241 6.660000000000001e-59   NTclustered gi|300676723|gb|GQ377712.1| 323453 g36833 i0 79.758 1.05932203389831 331 67 94 0 22 352 369 699 Heteromita sp. PRA-74 elongation factor 2 (ef2) mRNA, partial cds blastn 375 241 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
9346325 9346325 PRJNA407886_P_NODE_82388_length_239_cov_2.759036_g80694_i0 PRJNA407886 82388 239 2.759036 6.59409604 Thaumatomonas seravini 188939 SAR_Eukaryotes SAR_Eukaryotes 292 1.1599999999999999e-74   NTclustered gi|160337402|gb|EF455799.1| 188939 g80694 i0 88.703 93.9623430962343 239 27 100 0 1 239 32 270 Thaumatomonas seravini beta-tubulin (btub) gene, partial cds blastn 22457 292 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas seravini
11895999 11895999 PRJNA407886_P_NODE_30090_length_417_cov_2.494186_g28397_i0 PRJNA407886 30090 417 2.494186 10.40075562 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 182 4.9e-41   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g28397 i0 88.667 2.5347721822542 150 15 36 2 6 154 3695 3843 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 1057 182 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
13171216 13171216 PRJNA407886_P_NODE_45251_length_322_cov_2.682731_g43557_i0 PRJNA407886 45251 322 2.682731 8.63839382 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 132 3.77e-26   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g43557 i0 97.403 17.7515527950311 77 2 46 0 3 79 3763 3839 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 5716 132 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
16994890 16994890 PRJNA407886_P_NODE_41734_length_337_cov_4.719697_g40040_i0 PRJNA407886 41734 337 4.719697 15.90537889 Bodomorpha sp. HFCC55 624126 SAR_Eukaryotes SAR_Eukaryotes 606 5.409999999999998e-169   NTclustered gi|225216790|gb|FJ176705.1| 624126 g40040 i0 99.11 1.99406528189911 337 3 100 0 1 337 719 383 Bodomorpha sp. 28S ribosomal RNA gene, partial sequence blastn 672 606 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC55
16995698 16995698 PRJNA407886_P_NODE_83434_length_229_cov_5.884615_g81740_i0 PRJNA407886 83434 229 5.884615 13.47576835 Cryothecomonas sp. APCC MC5-1Cryo 741088 SAR_Eukaryotes SAR_Eukaryotes 156 1.51e-33   NTclustered gi|290760480|gb|GQ144683.1| 741088 g81740 i0 79.399 32.2445414847162 233 38 100 8 1 229 2019 2245 Cryothecomonas sp. APCC MC5-1Cryo large subunit ribosomal RNA gene, partial sequence blastn 7384 156 1 Eukaryota Sar   Cercozoa Thecofilosea Cryomonadida Protaspidae Cryothecomonas Cryothecomonas sp. APCC MC5-1Cryo
16995701 16995701 PRJNA407886_P_NODE_83694_length_227_cov_2.831169_g82000_i0 PRJNA407886 83694 227 2.831169 6.42675363 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 209 1.13e-49   NTclustered gi|300676723|gb|GQ377712.1| 323453 g82000 i0 83.26 1 227 38 100 0 1 227 570 796 Heteromita sp. PRA-74 elongation factor 2 (ef2) mRNA, partial cds blastn 227 209 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
19542954 19542954 PRJNA407886_P_NODE_30196_length_416_cov_2.591837_g28503_i0 PRJNA407886 30196 416 2.591837 10.78204192 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 721 0   NTclustered gi|48727871|gb|AY620361.1| 175275 g28503 i0 97.852 93.1538461538462 419 5 100 3 1 416 1121 704 Uncultured cercozoan clone 7-3.4 small subunit ribosomal RNA gene, partial sequence blastn 38752 721 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
22094617 22094617 PRJNA407886_P_NODE_80958_length_241_cov_2.255952_g79264_i0 PRJNA407886 80958 241 2.255952 5.43684432 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 176 1.23e-39   NTclustered gi|238617602|gb|FJ973377.1| 188950 g79264 i0 81.301 41.49377593361 246 20 100 12 1 241 2721 2945 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 10000 176 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
22759125 22759125 PRJNA407886_P_NODE_39858_length_347_cov_2.149635_g38164_i0 PRJNA407886 39858 347 2.149635 7.45923345 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 636 7.13e-178   NTclustered gi|82547952|gb|DQ211594.1| 188950 g38164 i0 99.712 97.4063400576369 347 1 100 0 1 347 1009 663 Bodomorpha minima strain HFCC55 18S ribosomal RNA gene, partial sequence blastn 33800 636 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;