RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA407886" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 4 ✖

bioproject 1

  • PRJNA407886 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4244886 4244886 PRJNA407886_P_NODE_61844_length_269_cov_2.346939_g60150_i0 PRJNA407886 61844 269 2.346939 6.31326591 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 257 4.87e-64   NTclustered gi|551555198|ref|XM_005764739.1| 280463 g60150 i0 86.066 92.8810408921933 244 29 89 4 1 240 1031 789 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 24985 257 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
6795173 6795173 PRJNA407886_P_NODE_42906_length_332_cov_1.810811_g41212_i0 PRJNA407886 42906 332 1.810811 6.01189252 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 193 1.77e-44   NTclustered gi|551548842|ref|XM_005762007.1| 280463 g41212 i0 81.435 17.4066265060241 237 42 71 2 8 243 169 404 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 5779 193 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
14446774 14446774 PRJNA407886_P_NODE_64212_length_263_cov_2.200000_g62518_i0 PRJNA407886 64212 263 2.2 5.786 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 54.7 0.007   NTclustered gi|551565513|ref|XM_005769136.1| 280463 g62518 i0 100 0.110266159695817 29 0 11 0 13 41 4600 4628 Emiliania huxleyi CCMP1516 hypothetical protein partial mRNA blastn 29 54.7 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
24644612 24644612 PRJNA407886_P_NODE_83900_length_226_cov_2.013072_g82206_i0 PRJNA407886 83900 226 2.013072 4.54954272 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 58.4 4.32e-4   NTclustered gi|551609532|ref|XM_005785912.1| 280463 g82206 i0 85.965 1.34955752212389 57 5 25 2 25 81 574 627 Emiliania huxleyi CCMP1516 hypothetical protein partial mRNA blastn 305 58.4 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;