RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA407368" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA407368 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1689996 1689996 PRJNA407368_S_NODE_7422_length_191_cov_2.481481_g7320_i0 PRJNA407368 7422 191 2.481481 4.73962871 Schizoplasmodiopsis vulgaris 435421 Evosea other_Eukaryota 152 1.57e-32   NTclustered gi|146448827|gb|EF513180.1| 435421 g7320 i0 81.443 96.6806282722513 194 29 99 7 2 191 1467 1657 Schizoplasmodiopsis vulgaris small subunit ribosomal RNA gene, partial sequence blastn 18466 152 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Schizoplasmodiopsis Schizoplasmodiopsis vulgaris
2965845 2965845 PRJNA407368_S_NODE_5003_length_249_cov_2.513636_g4901_i0 PRJNA407368 5003 249 2.513636 6.25895364 Dictyostelium discoideum 44689 Evosea other_Eukaryota 359 1.19e-94   NTclustered gi|66821326|ref|XM_639065.1| 352472 g4901 i0 92.742 98.3052208835341 248 18 99 0 1 248 926 679 Dictyostelium discoideum AX4 hypothetical protein (act13) mRNA, complete cds blastn 24478 359 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
16384147 16384147 PRJNA407368_S_NODE_8233_length_178_cov_1.879195_g8131_i0 PRJNA407368 8233 178 1.879195 3.3449671 Flamella 490353 Evosea other_Eukaryota 305 1.05e-78   NTclustered gi|163943979|gb|EU186023.1| 490516 g8131 i0 100 59.9662921348315 165 0 93 0 1 165 1527 1691 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 10674 305 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
18266750 18266750 PRJNA407368_S_NODE_6995_length_198_cov_4.538462_g6893_i0 PRJNA407368 6995 198 4.538462 8.98615476 Flamella balnearia 490516 Evosea other_Eukaryota 350 5.44e-92   NTclustered gi|163943979|gb|EU186023.1| 490516 g6893 i0 98.485 48.7373737373737 198 3 100 0 1 198 1491 1294 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 9650 350 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
18266808 18266808 PRJNA407368_S_NODE_9895_length_157_cov_3.109375_g9793_i0 PRJNA407368 9895 157 3.109375 4.88171875 Dictyostelium purpureum 5786 Evosea other_Eukaryota 222 9.329999999999999e-54   NTclustered gi|330799499|ref|XM_003287734.1| 5786 g9793 i0 93.878 94.8853503184713 147 9 94 0 1 147 235 89 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_72359), partial mRNA blastn 14897 222 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
18933162 18933162 PRJNA407368_S_NODE_2075_length_428_cov_16.358396_g1974_i0 PRJNA407368 2075 428 16.358396 70.01393488 Flamella 490353 Evosea other_Eukaryota 734 0   NTclustered gi|163943979|gb|EU186023.1| 490516 g1974 i0 99.504 72.3224299065421 403 2 100 0 1 403 995 593 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 30954 734 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
20207863 20207863 PRJNA407368_S_NODE_1316_length_551_cov_14.798851_g1229_i0 PRJNA407368 1316 551 14.798851 81.54166901 Flamella 490353 Evosea other_Eukaryota 761 0   NTclustered gi|163943979|gb|EU186023.1| 490516 g1229 i0 99.287 67.3466424682396 421 3 76 0 106 526 1013 593 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 37108 761 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
24033389 24033389 PRJNA407368_S_NODE_10599_length_150_cov_9.206612_g10497_i0 PRJNA407368 10599 150 9.206612 13.809918 Flamella 490353 Evosea other_Eukaryota 278 1.85e-70   NTclustered gi|163943979|gb|EU186023.1| 490516 g10497 i0 100 76.9333333333333 150 0 100 0 1 150 361 212 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 11540 278 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;