contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA407368" and tax_kingdom = "Thermotogati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1689907 | 1689907 | PRJNA407368_S_NODE_3482_length_314_cov_20.810526_g3380_i0 | PRJNA407368 | 3482 | 314 | 20.810526 | 65.34505164 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 398 | 3.279999999999999e-106 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g3380 | i0 | 89.935 | 734.315286624204 | 308 | 31 | 100 | 0 | 7 | 314 | 544516 | 544209 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 230575 | 398 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 3632606 | 3632606 | PRJNA407368_S_NODE_9283_length_164_cov_6.022222_g9181_i0 | PRJNA407368 | 9283 | 164 | 6.022222 | 9.87644408 | Deinococcus | 1298 | Bacteria | Bacteria | 265 | 1.6199999999999998e-66 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g9181 | i0 | 100 | 260 | 143 | 0 | 87 | 0 | 22 | 164 | 3061135 | 3060993 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 42640 | 265 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 4909660 | 4909660 | PRJNA407368_S_NODE_1704_length_479_cov_26.215556_g1608_i0 | PRJNA407368 | 1704 | 479 | 26.215556 | 125.57251324 | Deinococcus | 1298 | Bacteria | Bacteria | 355 | 3.17e-93 | NTclustered | gi|485099143|ref|NR_102538.1| | 432329 | g1608 | i0 | 81.116 | 236.091858037578 | 466 | 69 | 95 | 15 | 20 | 473 | 20 | 478 | Deinococcus peraridilitoris strain KR-200 23S ribosomal RNA gene, complete sequence | blastn | 113088 | 355 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus peraridilitoris | ||
| 5518920 | 5518920 | PRJNA407368_S_NODE_6745_length_203_cov_6.172414_g6643_i0 | PRJNA407368 | 6745 | 203 | 6.172414 | 12.53000042 | Jonquetella anthropi | 428712 | Bacteria | Bacteria | 364 | 2e-96 | NTclustered | gi|194410714|gb|EU840722.1| | 428712 | g6643 | i0 | 99.015 | 73.3103448275862 | 203 | 2 | 100 | 0 | 1 | 203 | 215 | 417 | Jonquetella anthropi strain E3_33 23S ribosomal RNA gene, partial sequence | blastn | 14882 | 364 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Dethiosulfovibrionaceae | Jonquetella | Jonquetella anthropi | ||
| 6184799 | 6184799 | PRJNA407368_S_NODE_8345_length_176_cov_3.156463_g8243_i0 | PRJNA407368 | 8345 | 176 | 3.156463 | 5.55537488 | root | 1 | Root_unresolved | Root_unresolved | 326 | 7.92e-85 | NTclustered | gi|45385854|gb|AY554280.1| | 274 | g8243 | i0 | 100 | 108 | 176 | 0 | 100 | 0 | 1 | 176 | 1259 | 1084 | Thermus thermophilus 16S ribosomal RNA gene, partial sequence | blastn | 19008 | 326 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 10009778 | 10009778 | PRJNA407368_S_NODE_3748_length_301_cov_234.014706_g3646_i0 | PRJNA407368 | 3748 | 301 | 234.014706 | 704.38426506 | Deinococcus | 1298 | Bacteria | Bacteria | 255 | 1.99e-63 | NTclustered | gi|1752957117|gb|MN519553.1| | 47478 | g3646 | i0 | 92.737 | 98.7574750830565 | 179 | 10 | 97 | 3 | 120 | 296 | 107 | 284 | Deinococcus sp. strain J16OP19 16S ribosomal RNA gene, partial sequence | blastn | 29726 | 255 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 10618938 | 10618938 | PRJNA407368_S_NODE_1149_length_589_cov_1530.469643_g1070_i0 | PRJNA407368 | 1149 | 589 | 1530.469643 | 9014.46619727 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 922 | 0 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g1070 | i0 | 95.353 | 303.393887945671 | 581 | 26 | 99 | 1 | 9 | 589 | 2417457 | 2418036 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 178699 | 922 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 11893845 | 11893845 | PRJNA407368_S_NODE_1150_length_589_cov_1449.985714_g1071_i0 | PRJNA407368 | 1150 | 589 | 1449.985714 | 8540.41585546 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 944 | 0 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g1071 | i0 | 96.041 | 294.811544991511 | 581 | 22 | 99 | 1 | 1 | 581 | 2418036 | 2417457 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 173644 | 944 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 11893932 | 11893932 | PRJNA407368_S_NODE_4770_length_257_cov_10.241228_g4668_i0 | PRJNA407368 | 4770 | 257 | 10.241228 | 26.31995596 | Deinococcus actinosclerus | 1768108 | Bacteria | Bacteria | 296 | 9.78e-76 | NTclustered | gi|972944657|gb|CP013910.1| | 1768108 | g4668 | i0 | 87.692 | 162.630350194553 | 260 | 25 | 100 | 7 | 1 | 257 | 73432 | 73687 | Deinococcus actinosclerus strain BM2 chromosome, complete genome | blastn | 41796 | 296 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus actinosclerus | ||
| 12560377 | 12560377 | PRJNA407368_S_NODE_3390_length_320_cov_22.608247_g3288_i0 | PRJNA407368 | 3390 | 320 | 22.608247 | 72.3463904 | Deinococcus | 1298 | Bacteria | Bacteria | 405 | 1.9999999999999997e-108 | NTclustered | gi|2461130460|gb|OQ647331.1| | 47478 | g3288 | i0 | 96.356 | 106.2625 | 247 | 8 | 77 | 1 | 74 | 320 | 175 | 420 | Deinococcus sp. strain BFS2HB25 16S ribosomal RNA gene, partial sequence | blastn | 34004 | 405 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 12560427 | 12560427 | PRJNA407368_S_NODE_9690_length_159_cov_32.892308_g9588_i0 | PRJNA407368 | 9690 | 159 | 32.892308 | 52.29876972 | Deinococcus | 1298 | Bacteria | Bacteria | 254 | 3.36e-63 | NTclustered | gi|470488003|ref|NR_076846.1| | 55148 | g9588 | i0 | 97.945 | 200.716981132075 | 146 | 3 | 92 | 0 | 14 | 159 | 2358 | 2213 | Deinococcus proteolyticus strain MRP 23S ribosomal RNA gene, complete sequence | blastn | 31914 | 254 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus proteolyticus | ||
| 13835207 | 13835207 | PRJNA407368_S_NODE_4431_length_270_cov_28.585062_g4329_i0 | PRJNA407368 | 4431 | 270 | 28.585062 | 77.1796674 | Bacteria | 2 | Bacteria | Bacteria | 460 | 3.4699999999999996e-125 | NTclustered | gi|281313228|gb|GU214129.1| | 158789 | g4329 | i0 | 97.407 | 138.033333333333 | 270 | 7 | 100 | 0 | 1 | 270 | 1030 | 1299 | Uncultured Deinococcus sp. clone IAFpp7118 16S ribosomal RNA gene, partial sequence | blastn | 37269 | 460 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | uncultured Deinococcus sp. | ||
| 13835229 | 13835229 | PRJNA407368_S_NODE_7151_length_195_cov_297.018072_g7049_i0 | PRJNA407368 | 7151 | 195 | 297.018072 | 579.1852404 | root | 1 | Root_unresolved | Root_unresolved | 361 | 2.46e-95 | NTclustered | gi|2113031129|gb|OK500351.1| | 47478 | g7049 | i0 | 100 | 104 | 195 | 0 | 100 | 0 | 1 | 195 | 612 | 418 | Deinococcus sp. strain R11 16S ribosomal RNA gene, partial sequence | blastn | 20280 | 361 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 16992611 | 16992611 | PRJNA407368_S_NODE_3854_length_296_cov_29.041199_g3752_i0 | PRJNA407368 | 3854 | 296 | 29.041199 | 85.96194904 | Deinococcus irradiatisoli | 2202254 | Bacteria | Bacteria | 394 | 3.96e-105 | NTclustered | gi|1392964945|gb|CP029494.1| | 2202254 | g3752 | i0 | 91.579 | 204.368243243243 | 285 | 24 | 96 | 0 | 11 | 295 | 397231 | 397515 | Deinococcus irradiatisoli strain 17bor-2 chromosome, complete genome | blastn | 60493 | 394 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus irradiatisoli | ||
| 18933176 | 18933176 | PRJNA407368_S_NODE_3855_length_296_cov_13.865169_g3753_i0 | PRJNA407368 | 3855 | 296 | 13.865169 | 41.04090024 | Deinococcus | 1298 | Bacteria | Bacteria | 516 | 8.11e-142 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g3753 | i0 | 99.298 | 202.195945945946 | 285 | 2 | 96 | 0 | 11 | 295 | 1637039 | 1636755 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 59850 | 516 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 20207899 | 20207899 | PRJNA407368_S_NODE_3836_length_297_cov_15.541045_g3734_i0 | PRJNA407368 | 3836 | 297 | 15.541045 | 46.15690365 | Deinococcus | 1298 | Bacteria | Bacteria | 508 | 1.36e-139 | NTclustered | gi|470488003|ref|NR_076846.1| | 55148 | g3734 | i0 | 98.606 | 203.771043771044 | 287 | 4 | 97 | 0 | 11 | 297 | 1955 | 2241 | Deinococcus proteolyticus strain MRP 23S ribosomal RNA gene, complete sequence | blastn | 60520 | 508 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus proteolyticus | ||
| 20207934 | 20207934 | PRJNA407368_S_NODE_7276_length_193_cov_38.140244_g7174_i0 | PRJNA407368 | 7276 | 193 | 38.140244 | 73.61067092 | Deinococcus | 1298 | Bacteria | Bacteria | 268 | 1.5199999999999998e-67 | NTclustered | gi|470488003|ref|NR_076846.1| | 55148 | g7174 | i0 | 91.753 | 208.549222797927 | 194 | 14 | 100 | 2 | 1 | 193 | 823 | 1015 | Deinococcus proteolyticus strain MRP 23S ribosomal RNA gene, complete sequence | blastn | 40250 | 268 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus proteolyticus | ||
| 20816823 | 20816823 | PRJNA407368_S_NODE_857_length_701_cov_31.352679_g788_i0 | PRJNA407368 | 857 | 701 | 31.352679 | 219.78227979 | Deinococcus maricopensis | 309887 | Bacteria | Bacteria | 628 | 2.5399999999999995e-175 | NTclustered | gi|319753907|gb|CP002454.1| | 709986 | g788 | i0 | 83.218 | 840.843081312411 | 721 | 85 | 99 | 31 | 1 | 699 | 639983 | 640689 | Deinococcus maricopensis DSM 21211, complete genome | blastn | 589431 | 628 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus maricopensis | ||
| 21483409 | 21483409 | PRJNA407368_S_NODE_2237_length_410_cov_146.070866_g2136_i0 | PRJNA407368 | 2237 | 410 | 146.070866 | 598.8905506 | Deinococcus | 1298 | Bacteria | Bacteria | 641 | 1.84e-179 | NTclustered | gi|1073549716|gb|KX946495.1| | 47478 | g2136 | i0 | 94.891 | 107.951219512195 | 411 | 19 | 100 | 2 | 1 | 410 | 469 | 878 | Deinococcus sp. strain FX4 16S ribosomal RNA gene, partial sequence | blastn | 44260 | 647 | 0.990726429675425 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 22091570 | 22091570 | PRJNA407368_S_NODE_4718_length_259_cov_9.773913_g4616_i0 | PRJNA407368 | 4718 | 259 | 9.773913 | 25.31443467 | Deinococcus actinosclerus | 1768108 | Bacteria | Bacteria | 457 | 4.279999999999999e-124 | NTclustered | gi|972944657|gb|CP013910.1| | 1768108 | g4616 | i0 | 98.456 | 169.602316602317 | 259 | 4 | 100 | 0 | 1 | 259 | 73687 | 73429 | Deinococcus actinosclerus strain BM2 chromosome, complete genome | blastn | 43927 | 457 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus actinosclerus | ||
| 22758623 | 22758623 | PRJNA407368_S_NODE_2138_length_420_cov_170.708440_g2037_i0 | PRJNA407368 | 2138 | 420 | 170.70844 | 716.975448 | Bacteria | 2 | Bacteria | Bacteria | 732 | 0 | NTclustered | gi|2866351997|gb|PQ721879.1| | 47478 | g2037 | i0 | 98.095 | 105.752380952381 | 420 | 8 | 100 | 0 | 1 | 420 | 857 | 438 | Deinococcus sp. strain L174 16S ribosomal RNA gene, partial sequence | blastn | 44416 | 732 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 23367167 | 23367167 | PRJNA407368_S_NODE_3959_length_291_cov_332.538168_g3857_i0 | PRJNA407368 | 3959 | 291 | 332.538168 | 967.68606888 | Deinococcus puniceus | 1182568 | Bacteria | Bacteria | 302 | 2.42e-77 | NTclustered | gi|1028459476|gb|CP011387.1| | 1182568 | g3857 | i0 | 89.256 | 221.632302405498 | 242 | 25 | 83 | 1 | 50 | 291 | 71108 | 70868 | Deinococcus puniceus strain DY1, complete genome | blastn | 64495 | 302 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus puniceus | ||
| 24033399 | 24033399 | PRJNA407368_S_NODE_2319_length_402_cov_16.337802_g2218_i0 | PRJNA407368 | 2319 | 402 | 16.337802 | 65.67796404 | Thermus | 270 | Bacteria | Bacteria | 743 | 0 | NTclustered | gi|1701967042|dbj|AP019801.1| | 274 | g2218 | i0 | 100 | 135.410447761194 | 402 | 0 | 100 | 0 | 1 | 402 | 12985 | 12584 | Thermus thermophilus HC11 DNA, complete genome | blastn | 54435 | 743 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 24033410 | 24033410 | PRJNA407368_S_NODE_3319_length_323_cov_31.544218_g3217_i0 | PRJNA407368 | 3319 | 323 | 31.544218 | 101.88782414 | Bacteria | 2 | Bacteria | Bacteria | 357 | 5.74e-94 | NTclustered | gi|37223182|gb|AY379549.1| | 274 | g3217 | i0 | 99.49 | 143.173374613003 | 196 | 1 | 100 | 0 | 1 | 196 | 1149 | 954 | Thermus thermophilus TT700 23S ribosomal RNA, 5S ribosomal RNA, and tRNA-Gly genes, complete sequence | blastn | 46245 | 357 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 25307817 | 25307817 | PRJNA407368_S_NODE_1640_length_490_cov_200.479393_g1545_i0 | PRJNA407368 | 1640 | 490 | 200.479393 | 982.3490257 | Deinococcus | 1298 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|470488003|ref|NR_076846.1| | 55148 | g1545 | i0 | 94.737 | 197.326530612245 | 456 | 21 | 93 | 3 | 3 | 456 | 1799 | 1345 | Deinococcus proteolyticus strain MRP 23S ribosomal RNA gene, complete sequence | blastn | 96690 | 712 | 0.991573033707865 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus proteolyticus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;