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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA407368" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA407368 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4242179 4242179 PRJNA407368_S_NODE_4284_length_277_cov_6.883065_g4182_i0 PRJNA407368 4284 277 6.883065 19.06609005 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 335 2.2599999999999993e-87   NTclustered gi|563351663|gb|CP006913.1| 1394709 g4182 i0 88.489 85.043321299639 278 30 100 2 1 277 126014 125738 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 23557 335 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
6792804 6792804 PRJNA407368_S_NODE_4366_length_273_cov_76.139344_g4264_i0 PRJNA407368 4366 273 76.139344 207.86040912 Candidatus Dependentiae bacterium Noda2021 2891165 Bacteria Bacteria 377 3.64e-100   NTclustered gi|2131577866|dbj|AP025250.1| 2891165 g4264 i0 94 170.937728937729 250 13 92 2 24 273 217111 216864 Candidatus Dependentiae bacterium Noda2021 DNA, complete genome blastn 46666 377 1 Bacteria Bacteria candidate phyla             Candidatus Dependentiae bacterium Noda2021
10619064 10619064 PRJNA407368_S_NODE_6009_length_219_cov_22.352632_g5907_i0 PRJNA407368 6009 219 22.352632 48.95226408 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 250 6.3999999999999996e-62   NTclustered gi|563351663|gb|CP006913.1| 1394709 g5907 i0 87.273 322.607305936073 220 26 100 2 1 219 125768 125550 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 70651 250 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
22091622 22091622 PRJNA407368_S_NODE_7038_length_197_cov_8.744048_g6936_i0 PRJNA407368 7038 197 8.744048 17.22577456 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 82.4 2.18e-11   NTclustered gi|2621704339|emb|OY760935.1| 2044595 g6936 i0 78.082 7.99492385786802 146 21 71 9 58 197 1137364 1137224 MAG: Candidatus Gracilibacteria bacterium isolate 3c0776cb-dd52-49a3-965b-30fb91b92491 genome assembly, chromosome: 1 blastn 1575 82.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;