RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA407087" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA407087 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3632509 3632509 PRJNA407087_S_NODE_4463_length_256_cov_18.982379_g4000_i0 PRJNA407087 4463 256 18.982379 48.59489024 Eukaryota 2759 Fungi Fungi 204 6.07e-48   NTclustered gi|82398466|gb|DQ273800.1| 4837 g4000 i0 98.291 47.78515625 117 1 46 1 1 117 2301 2186 Phycomyces blakesleeanus isolate AFTOL-ID 184 28S ribosomal RNA gene, partial sequence blastn 12233 204 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
5518709 5518709 PRJNA407087_S_NODE_2185_length_441_cov_12.009709_g1725_i0 PRJNA407087 2185 441 12.009709 52.96281669 Gamsiella multidivaricata 101098 Fungi Fungi 250 1.41e-61   NTclustered gi|2323787328|ref|XM_051556087.1| 101098 g1725 i0 82.686 11.7551020408163 283 47 64 2 24 305 431 150 Gamsiella multidivaricata 60S ribosomal protein L3 (BC939DRAFT_454620), mRNA blastn 5184 250 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
5518720 5518720 PRJNA407087_S_NODE_3865_length_285_cov_10.156250_g3402_i0 PRJNA407087 3865 285 10.15625 28.9453125 Phycomyces blakesleeanus 4837 Fungi Fungi 148 3.2599999999999992e-31   NTclustered gi|1069947120|ref|XM_018433359.1| 763407 g3402 i0 83.133 7.40701754385965 166 25 58 1 120 285 108 270 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 2111 148 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
11893815 11893815 PRJNA407087_S_NODE_7590_length_176_cov_11.414966_g7127_i0 PRJNA407087 7590 176 11.414966 20.09034016 Phycomyces blakesleeanus 4837 Fungi Fungi 93.5 8.75e-15   NTclustered gi|1069952193|ref|XM_018439310.1| 763407 g7127 i0 90.141 6.57386363636364 71 7 40 0 102 172 103 173 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 1157 93.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
13168731 13168731 PRJNA407087_S_NODE_5891_length_208_cov_3.162011_g5428_i0 PRJNA407087 5891 208 3.162011 6.57698288 Rhizomucor pusillus 4840 Fungi Fungi 165 2.24e-36   NTclustered gi|2837715318|ref|XM_069385123.1| 4840 g5428 i0 82.888 44.0961538461538 187 28 89 4 23 207 698 514 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_6243), partial mRNA blastn 9172 165 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
23367046 23367046 PRJNA407087_S_NODE_3699_length_295_cov_4.857143_g3236_i0 PRJNA407087 3699 295 4.857143 14.32857185 Phycomyces blakesleeanus 4837 Fungi Fungi 172 2.0099999999999999e-38   NTclustered gi|1069966156|ref|XM_018429855.1| 763407 g3236 i0 81.731 3.04067796610169 208 36 70 2 89 295 659 453 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 897 172 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
25307793 25307793 PRJNA407087_S_NODE_4280_length_265_cov_2.788136_g3817_i0 PRJNA407087 4280 265 2.788136 7.3885604 Fungi 4751 Fungi Fungi 202 2.27e-47   NTclustered gi|2312|emb|X54730.1| 4829 g3817 i0 82.969 83.3735849056604 229 33 85 5 39 264 1505 1280 Absidia glauca tef-1 gene for elongation factor 1-alpha blastn 22094 204 0.990196078431373 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Absidia Absidia glauca

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;