contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA407087" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1081721 | 1081721 | PRJNA407087_S_NODE_7521_length_177_cov_5.324324_g7058_i0 | PRJNA407087 | 7521 | 177 | 5.324324 | 9.42405348 | root | 1 | Root_unresolved | Root_unresolved | 327 | 2.2199999999999996e-85 | NTclustered | gi|2301668455|gb|OP432291.1| | 29466 | g7058 | i0 | 100 | 100 | 177 | 0 | 100 | 0 | 1 | 177 | 879 | 703 | Veillonella parvula strain Granada 16S ribosomal RNA gene, partial sequence | blastn | 17700 | 327 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella parvula | ||
| 4909639 | 4909639 | PRJNA407087_S_NODE_2204_length_438_cov_15.567237_g1744_i0 | PRJNA407087 | 2204 | 438 | 15.567237 | 68.18449806 | Streptococcus | 1301 | Bacteria | Bacteria | 787 | 0 | NTclustered | gi|1957483218|gb|CP067992.1| | 28037 | g1744 | i0 | 99.087 | 328.799086757991 | 438 | 4 | 100 | 0 | 1 | 438 | 17669 | 18106 | Streptococcus mitis strain S022-V7-A3 chromosome, complete genome | blastn | 144014 | 793 | 0.992433795712484 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 6792704 | 6792704 | PRJNA407087_S_NODE_8166_length_168_cov_4.992806_g7703_i0 | PRJNA407087 | 8166 | 168 | 4.992806 | 8.38791408 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 305 | 9.81e-79 | NTclustered | gi|1540173839|emb|LR134484.1| | 1379 | g7703 | i0 | 99.405 | 356.916666666667 | 168 | 1 | 100 | 0 | 1 | 168 | 9597 | 9764 | Gemella haemolysans strain NCTC10459 genome assembly, chromosome: 1 | blastn | 59962 | 305 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 11284952 | 11284952 | PRJNA407087_S_NODE_7529_length_177_cov_3.891892_g7066_i0 | PRJNA407087 | 7529 | 177 | 3.891892 | 6.88864884 | root | 1 | Root_unresolved | Root_unresolved | 327 | 2.2199999999999996e-85 | NTclustered | gi|285796811|gb|GU406793.1| | 29466 | g7066 | i0 | 100 | 100 | 177 | 0 | 100 | 0 | 1 | 177 | 193 | 17 | Veillonella parvula clone GZ070 16S ribosomal RNA gene, partial sequence | blastn | 17700 | 327 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella parvula | ||
| 13835171 | 13835171 | PRJNA407087_S_NODE_7991_length_170_cov_102.446809_g7528_i0 | PRJNA407087 | 7991 | 170 | 102.446809 | 174.1595753 | Listeria | 1637 | Bacteria | Bacteria | 309 | 7.64e-80 | NTclustered | gi|2885371214|gb|PQ865990.1| | 1639 | g7528 | i0 | 99.412 | 200.017647058824 | 170 | 1 | 100 | 0 | 1 | 170 | 760 | 929 | Listeria monocytogenes isolate Hass-Sheep isolate 2 16S ribosomal RNA gene, partial sequence | blastn | 34003 | 309 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 15109407 | 15109407 | PRJNA407087_S_NODE_5752_length_211_cov_36.829670_g5289_i0 | PRJNA407087 | 5752 | 211 | 36.82967 | 77.7106037 | Bacillati | 1783272 | Bacteria | Bacteria | 368 | 1.6200000000000002e-97 | NTclustered | gi|1821213578|gb|CP043788.1| | 1282 | g5289 | i0 | 98.104 | 497.644549763033 | 211 | 4 | 100 | 0 | 1 | 211 | 1521660 | 1521870 | Staphylococcus epidermidis strain SESURV_p2_0614 chromosome | blastn | 105003 | 368 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 17659226 | 17659226 | PRJNA407087_S_NODE_9214_length_157_cov_3.265625_g8751_i0 | PRJNA407087 | 9214 | 157 | 3.265625 | 5.12703125 | Veillonella | 29465 | Bacteria | Bacteria | 285 | 1.17e-72 | NTclustered | gi|2672138803|gb|CP138632.1| | 29466 | g8751 | i0 | 99.363 | 494.821656050955 | 157 | 1 | 100 | 0 | 1 | 157 | 2053 | 1897 | Veillonella parvula strain PK1910 chromosome, complete genome | blastn | 77687 | 285 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella parvula | ||
| 20207835 | 20207835 | PRJNA407087_S_NODE_1916_length_478_cov_34.730512_g1284_i1 | PRJNA407087 | 1916 | 478 | 34.730512 | 166.01184736 | Bacteria | 2 | Bacteria | Bacteria | 833 | 0 | NTclustered | gi|1848626851|gb|CP054017.1| | 1292 | g1284 | i1 | 98.117 | 462.949790794979 | 478 | 9 | 100 | 0 | 1 | 478 | 1128437 | 1128914 | Staphylococcus warneri strain FDAARGOS_754 chromosome, complete genome | blastn | 221290 | 833 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 20816619 | 20816619 | PRJNA407087_S_NODE_6757_length_190_cov_6.751553_g6294_i0 | PRJNA407087 | 6757 | 190 | 6.751553 | 12.8279507 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 302 | 1.47e-77 | NTclustered | gi|1540173839|emb|LR134484.1| | 1379 | g6294 | i0 | 95.263 | 410.863157894737 | 190 | 9 | 100 | 0 | 1 | 190 | 10086 | 10275 | Gemella haemolysans strain NCTC10459 genome assembly, chromosome: 1 | blastn | 78064 | 302 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 21483370 | 21483370 | PRJNA407087_S_NODE_1717_length_508_cov_46.306889_g1284_i0 | PRJNA407087 | 1717 | 508 | 46.306889 | 235.23899612 | Bacteria | 2 | Bacteria | Bacteria | 939 | 0 | NTclustered | gi|1848626851|gb|CP054017.1| | 1292 | g1284 | i0 | 100 | 483.663385826772 | 508 | 0 | 100 | 0 | 1 | 508 | 1128914 | 1128407 | Staphylococcus warneri strain FDAARGOS_754 chromosome, complete genome | blastn | 245701 | 939 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 21483371 | 21483371 | PRJNA407087_S_NODE_1837_length_491_cov_20.402597_g1398_i0 | PRJNA407087 | 1837 | 491 | 20.402597 | 100.17675127 | Streptococcus | 1301 | Bacteria | Bacteria | 880 | 0 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g1398 | i0 | 98.982 | 345.075356415479 | 491 | 5 | 100 | 0 | 1 | 491 | 1571101 | 1571591 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 169432 | 885 | 0.994350282485876 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 22758597 | 22758597 | PRJNA407087_S_NODE_4418_length_258_cov_6.462882_g3955_i0 | PRJNA407087 | 4418 | 258 | 6.462882 | 16.67423556 | Staphylococcus | 1279 | Bacteria | Bacteria | 477 | 3.2699999999999985e-130 | NTclustered | gi|2894814215|gb|CP178526.1| | 1292 | g3955 | i0 | 100 | 99.7286821705426 | 258 | 0 | 100 | 0 | 1 | 258 | 2216266 | 2216009 | Staphylococcus warneri strain X5R13 chromosome, complete genome | blastn | 25730 | 477 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 24641406 | 24641406 | PRJNA407087_S_NODE_8200_length_168_cov_2.604317_g7737_i0 | PRJNA407087 | 8200 | 168 | 2.604317 | 4.37525256 | Solibacillus sp. FSL W8-0372 | 2921713 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|2709615959|gb|CP150204.1| | 2921713 | g7737 | i0 | 100 | 0.166666666666667 | 28 | 0 | 17 | 0 | 90 | 117 | 873214 | 873187 | Solibacillus sp. FSL W8-0372 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Solibacillus | Solibacillus sp. FSL W8-0372 | ||
| 24641414 | 24641414 | PRJNA407087_S_NODE_9820_length_152_cov_1.878049_g9357_i0 | PRJNA407087 | 9820 | 152 | 1.878049 | 2.85463448 | Anaerocolumna sedimenticola | 2696063 | Bacteria | Bacteria | 143 | 7.17e-30 | NTclustered | gi|1802166926|gb|CP048000.1| | 2696063 | g9357 | i0 | 86.822 | 422.907894736842 | 129 | 15 | 85 | 1 | 10 | 138 | 1199529 | 1199655 | Anaerocolumna sedimenticola strain CBA3638 chromosome, complete genome | blastn | 64282 | 143 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Anaerocolumna | Anaerocolumna sedimenticola | ||
| 25307795 | 25307795 | PRJNA407087_S_NODE_5560_length_216_cov_3.957219_g5097_i0 | PRJNA407087 | 5560 | 216 | 3.957219 | 8.54759304 | Veillonella | 29465 | Bacteria | Bacteria | 385 | 1.65e-102 | NTclustered | gi|2672138803|gb|CP138632.1| | 29466 | g5097 | i0 | 99.065 | 535.388888888889 | 214 | 2 | 99 | 0 | 3 | 216 | 886142 | 886355 | Veillonella parvula strain PK1910 chromosome, complete genome | blastn | 115644 | 385 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella parvula |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;