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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA407087" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 20 ✖

bioproject 1

  • PRJNA407087 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3632507 3632507 PRJNA407087_S_NODE_3863_length_285_cov_12.417969_g3400_i0 PRJNA407087 3863 285 12.417969 35.39121165 Phalansterium 136498 Evosea other_Eukaryota 340 5.02e-89   NTclustered gi|539395531|gb|KF539978.1| 1395795 g3400 i0 88.356 100.066666666667 292 22 99 8 3 285 413 125 Phalansterium sp. 1 JFP-2013 18S ribosomal RNA gene, partial sequence blastn 28519 340 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium sp. 1 JFP-2013
3632517 3632517 PRJNA407087_S_NODE_6383_length_197_cov_4.976190_g5920_i0 PRJNA407087 6383 197 4.97619 9.8030943 Dictyostelium 5782 Evosea other_Eukaryota 239 1.22e-58   NTclustered gi|330795966|ref|XM_003285993.1| 5786 g5920 i0 88.718 96.6243654822335 195 22 99 0 1 195 268 462 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_46519), mRNA blastn 19035 239 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
4242044 4242044 PRJNA407087_S_NODE_3444_length_315_cov_12.681818_g2981_i0 PRJNA407087 3444 315 12.681818 39.9477267 Phalansterium solitarium 136499 Evosea other_Eukaryota 311 4.41e-80   NTclustered gi|300078500|gb|GU001162.1| 136499 g2981 i0 90.041 75.1047619047619 241 22 76 2 1 240 3154 3393 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 23658 311 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
5518732 5518732 PRJNA407087_S_NODE_5045_length_232_cov_19.714286_g4582_i0 PRJNA407087 5045 232 19.714286 45.73714352 Phalansterium solitarium 136499 Evosea other_Eukaryota 309 1.11e-79   NTclustered gi|300078500|gb|GU001162.1| 136499 g4582 i0 90.948 61.5775862068966 232 18 99 2 3 232 4089 3859 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14286 309 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
5518754 5518754 PRJNA407087_S_NODE_9705_length_153_cov_1.967742_g9242_i0 PRJNA407087 9705 153 1.967742 3.01064526 Acytostelium subglobosum 361139 Evosea other_Eukaryota 89.8 9.55e-14   NTclustered gi|831785082|ref|XM_012902221.1| 1410327 g9242 i0 85.057 0.568627450980392 87 13 57 0 59 145 554 468 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 87 89.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
8068273 8068273 PRJNA407087_S_NODE_4887_length_238_cov_16.875598_g4424_i0 PRJNA407087 4887 238 16.875598 40.16392324 Phalansterium solitarium 136499 Evosea other_Eukaryota 185 2.0199999999999998e-42   NTclustered gi|300078500|gb|GU001162.1| 136499 g4424 i0 80.992 16.0210084033613 242 34 98 6 3 236 3348 3585 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3813 185 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
9343113 9343113 PRJNA407087_S_NODE_3788_length_289_cov_13.615385_g3325_i0 PRJNA407087 3788 289 13.615385 39.34846265 Phalansterium solitarium 136499 Evosea other_Eukaryota 381 2.9999999999999997e-101   NTclustered gi|300078500|gb|GU001162.1| 136499 g3325 i0 91.429 67.2871972318339 280 20 96 4 12 289 3121 2844 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19446 381 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
9343155 9343155 PRJNA407087_S_NODE_9288_length_156_cov_7.503937_g8825_i0 PRJNA407087 9288 156 7.503937 11.70614172 Phalansterium sp. SMalavin-2023a 3078203 Evosea other_Eukaryota 219 1.2e-52   NTclustered gi|2583707790|gb|OR613015.1| 3078203 g8825 i0 92.208 93.5897435897436 154 12 99 0 3 156 1846 1693 Phalansterium sp. SMalavin-2023a strain SCCAP Ph185 small subunit ribosomal RNA gene, partial sequence blastn 14600 219 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium sp. SMalavin-2023a
10618892 10618892 PRJNA407087_S_NODE_4449_length_257_cov_3.982456_g3986_i0 PRJNA407087 4449 257 3.982456 10.23491192 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 154 6.23e-33   NTclustered gi|470505078|ref|XM_004348480.1| 1257118 g3986 i0 77.778 12.2217898832685 261 50 100 8 1 257 3383 3127 Acanthamoeba castellanii str. Neff DNAdirected RNA polymerase, beta subunit (ACA1_158460), partial mRNA blastn 3141 154 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10618896 10618896 PRJNA407087_S_NODE_4869_length_239_cov_5.176190_g4406_i0 PRJNA407087 4869 239 5.17619 12.3710941 Cochliopodium minus 313997 Discosea other_Eukaryota 287 5.409999999999999e-73   NTclustered gi|330902891|gb|JF298270.1| 313997 g4406 i0 88.608 96.1087866108787 237 25 99 2 2 237 1053 818 Cochliopodium minus clone 5201 actin gene, partial cds blastn 22970 287 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
10618907 10618907 PRJNA407087_S_NODE_6949_length_186_cov_27.452229_g6486_i0 PRJNA407087 6949 186 27.452229 51.06114594 Phalansterium arcticum 1958825 Evosea other_Eukaryota 333 5.069999999999999e-87   NTclustered gi|2489686157|gb|KX844828.2| 1958825 g6486 i0 98.925 99.8817204301075 186 2 100 0 1 186 1672 1487 Phalansterium arcticum strain SCL-Parc 18S ribosomal RNA gene, partial sequence blastn 18578 333 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium arcticum
11893777 11893777 PRJNA407087_S_NODE_2710_length_381_cov_3.375000_g2248_i0 PRJNA407087 2710 381 3.375 12.85875 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 58.4 7.81e-4   NTclustered gi|470469416|ref|XM_004341948.1| 1257118 g2248 i0 83.077 0.170603674540682 65 9 17 2 179 242 884 821 Acanthamoeba castellanii str. Neff MORN repeatcontaining protein (ACA1_050500), partial mRNA blastn 65 58.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13835158 13835158 PRJNA407087_S_NODE_5451_length_219_cov_3.915789_g4988_i0 PRJNA407087 5451 219 3.915789 8.57557791 Ripella 1217112 Discosea other_Eukaryota 377 2.81e-100   NTclustered gi|2666517889|gb|PP259000.1| 1973050 g4988 i0 98.598 93.4520547945205 214 2 97 1 7 219 939 726 Ripella sp. strain CHIESE83/2 small subunit ribosomal RNA gene, partial sequence blastn 20466 377 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp.
15717638 15717638 PRJNA407087_S_NODE_2993_length_353_cov_24.589506_g2531_i0 PRJNA407087 2993 353 24.589506 86.80095618 Phalansterium sp. 1 JFP-2013 1395795 Evosea other_Eukaryota 592 1.5899999999999997e-164   NTclustered gi|539395531|gb|KF539978.1| 1395795 g2531 i0 97.151 99.9886685552408 351 8 99 2 1 351 65 413 Phalansterium sp. 1 JFP-2013 18S ribosomal RNA gene, partial sequence blastn 35296 592 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium sp. 1 JFP-2013
15717676 15717676 PRJNA407087_S_NODE_893_length_775_cov_23.699732_g578_i0 PRJNA407087 893 775 23.699732 183.672923 Phalansterium solitarium 136499 Evosea other_Eukaryota 294 1.17e-74   NTclustered gi|300078500|gb|GU001162.1| 136499 g578 i0 81.769 26.0877419354839 373 49 91 9 1 357 4439 4808 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20218 294 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
16384065 16384065 PRJNA407087_S_NODE_3673_length_297_cov_25.876866_g3210_i0 PRJNA407087 3673 297 25.876866 76.85429202 Phalansterium 136498 Evosea other_Eukaryota 333 8.8e-87   NTclustered gi|300078500|gb|GU001162.1| 136499 g3210 i0 87.043 97.5286195286195 301 31 99 6 2 297 1556 1259 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 28966 333 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
18933140 18933140 PRJNA407087_S_NODE_5755_length_211_cov_23.016484_g5292_i0 PRJNA407087 5755 211 23.016484 48.56478124 Phalansterium 136498 Evosea other_Eukaryota 254 4.73e-63   NTclustered gi|2489686157|gb|KX844828.2| 1958825 g5292 i0 88.571 37.2274881516588 210 23 99 1 1 209 1307 1516 Phalansterium arcticum strain SCL-Parc 18S ribosomal RNA gene, partial sequence blastn 7855 254 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium arcticum
20816613 20816613 PRJNA407087_S_NODE_5757_length_211_cov_15.032967_g5294_i0 PRJNA407087 5757 211 15.032967 31.71956037 Phalansterium filosum 857046 Evosea other_Eukaryota 335 1.6399999999999994e-87   NTclustered gi|300078501|gb|GU001163.1| 857046 g5294 i0 95.261 100.981042654028 211 10 100 0 1 211 2130 1920 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21307 335 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
22758604 22758604 PRJNA407087_S_NODE_8158_length_168_cov_20.985612_g7695_i0 PRJNA407087 8158 168 20.985612 35.25582816 Phalansterium 136498 Evosea other_Eukaryota 222 1.02e-53   NTclustered gi|300078500|gb|GU001162.1| 136499 g7695 i0 90.476 122.47619047619 168 16 100 0 1 168 2698 2865 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20576 222 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
22758607 22758607 PRJNA407087_S_NODE_8998_length_159_cov_2.892308_g8535_i0 PRJNA407087 8998 159 2.892308 4.59876972 Vannellidae 95227 Discosea other_Eukaryota 294 1.98e-75   NTclustered gi|62865939|gb|AY929914.1| 325077 g8535 i0 100 100.031446540881 159 0 100 0 1 159 408 250 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 15905 294 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;