RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA404067" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA404067 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6792568 6792568 PRJNA404067_P_NODE_40346_length_195_cov_4.522388_g39959_i0 PRJNA404067 40346 195 4.522388 8.8186566 Triticeae associated alphaendornavirus 2789206 Viruses Viruses 327 2.5e-85   NTclustered gi|1933854982|gb|MW091544.1| 2789206 g39959 i0 96.923 1 195 6 100 0 1 195 8837 8643 Triticeae associated alphaendornavirus isolate Wheeler, complete genome blastn 195 327 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Triticeae associated alphaendornavirus
13168250 13168250 PRJNA404067_P_NODE_20031_length_237_cov_0.772727_g19644_i0 PRJNA404067 20031 237 0.772727 1.83136299 Triticeae associated alphaendornavirus 2789206 Viruses Viruses 394 3.069999999999999e-105   NTclustered gi|1933854982|gb|MW091544.1| 2789206 g19644 i0 96.624 1 237 8 100 0 1 237 1784 1548 Triticeae associated alphaendornavirus isolate Wheeler, complete genome blastn 237 394 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Triticeae associated alphaendornavirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;