contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA404067" and tax_phylum = "Chlamydiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4909329 | 4909329 | PRJNA404067_P_NODE_28464_length_214_cov_3.758170_g28077_i0 | PRJNA404067 | 28464 | 214 | 3.75817 | 8.0424838 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 351 | 1.66e-92 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g28077 | i0 | 96.262 | 166.308411214953 | 214 | 8 | 100 | 0 | 1 | 214 | 1249306 | 1249093 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 35590 | 351 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 11893224 | 11893224 | PRJNA404067_P_NODE_14150_length_276_cov_3.990698_g13763_i0 | PRJNA404067 | 14150 | 276 | 3.990698 | 11.01432648 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 440 | 4.6399999999999984e-119 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g13763 | i0 | 95.62 | 108.090579710145 | 274 | 12 | 99 | 0 | 1 | 274 | 1249716 | 1249989 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 29833 | 440 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 13834863 | 13834863 | PRJNA404067_P_NODE_29871_length_211_cov_5.113333_g29484_i0 | PRJNA404067 | 29871 | 211 | 5.113333 | 10.78913263 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 233 | 6.169999999999999e-57 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g29484 | i0 | 87.317 | 40.6303317535545 | 205 | 25 | 97 | 1 | 1 | 205 | 1249841 | 1250044 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 8573 | 233 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 14443358 | 14443358 | PRJNA404067_P_NODE_14492_length_273_cov_1.061321_g14105_i0 | PRJNA404067 | 14492 | 273 | 1.061321 | 2.89740633 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 313 | 1.04e-80 | NTclustered | gi|880804030|gb|KT258855.1| | 174324 | g14105 | i0 | 87.97 | 99.4945054945055 | 266 | 30 | 97 | 2 | 9 | 273 | 1 | 265 | Uncultured Chlamydiales bacterium clone CL46D 16S ribosomal RNA gene, partial sequence | blastn | 27162 | 313 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 15717106 | 15717106 | PRJNA404067_P_NODE_14173_length_276_cov_1.939535_g13786_i0 | PRJNA404067 | 14173 | 276 | 1.939535 | 5.3531166 | Candidatus Protochlamydia amoebophila | 362787 | Bacteria | Bacteria | 322 | 1.75e-83 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g13786 | i0 | 87.814 | 196.572463768116 | 279 | 29 | 100 | 4 | 1 | 276 | 1881584 | 1881860 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 54254 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 20816119 | 20816119 | PRJNA404067_P_NODE_18917_length_240_cov_2.882682_g18530_i0 | PRJNA404067 | 18917 | 240 | 2.882682 | 6.9184368 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 350 | 6.839999999999999e-92 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g18530 | i0 | 93.249 | 171.620833333333 | 237 | 16 | 99 | 0 | 3 | 239 | 1251784 | 1252020 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 41189 | 350 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 23366983 | 23366983 | PRJNA404067_P_NODE_6759_length_467_cov_3.514778_g6382_i0 | PRJNA404067 | 6759 | 467 | 3.514778 | 16.41401326 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 719 | 0 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g6382 | i0 | 94.635 | 175.304068522484 | 466 | 21 | 99 | 4 | 1 | 463 | 1250098 | 1250562 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 81867 | 719 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 24033072 | 24033072 | PRJNA404067_P_NODE_28459_length_214_cov_4.686275_g28072_i0 | PRJNA404067 | 28459 | 214 | 4.686275 | 10.0286285 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 222 | 1.36e-53 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g28072 | i0 | 91.875 | 47.5373831775701 | 160 | 11 | 100 | 2 | 56 | 214 | 176308 | 176150 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 10173 | 222 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;