RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA404067" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 9 ✖

bioproject 1

  • PRJNA404067 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1689728 1689728 PRJNA404067_P_NODE_6402_length_491_cov_459.460465_g6026_i0 PRJNA404067 6402 491 459.460465 2255.95088315 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.013   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g6026 i0 96.875 0.122199592668024 32 1 7 0 460 491 44 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 60 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
2965332 2965332 PRJNA404067_P_NODE_2643_length_1301_cov_10.150806_g2395_i0 PRJNA404067 2643 1301 10.150806 132.06198606 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.01   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g2395 i0 100 0.0453497309761722 30 0 2 0 1272 1301 85 56 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 59 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
6792568 6792568 PRJNA404067_P_NODE_40346_length_195_cov_4.522388_g39959_i0 PRJNA404067 40346 195 4.522388 8.8186566 Triticeae associated alphaendornavirus 2789206 Viruses Viruses 327 2.5e-85   NTclustered gi|1933854982|gb|MW091544.1| 2789206 g39959 i0 96.923 1 195 6 100 0 1 195 8837 8643 Triticeae associated alphaendornavirus isolate Wheeler, complete genome blastn 195 327 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Triticeae associated alphaendornavirus
13168250 13168250 PRJNA404067_P_NODE_20031_length_237_cov_0.772727_g19644_i0 PRJNA404067 20031 237 0.772727 1.83136299 Triticeae associated alphaendornavirus 2789206 Viruses Viruses 394 3.069999999999999e-105   NTclustered gi|1933854982|gb|MW091544.1| 2789206 g19644 i0 96.624 1 237 8 100 0 1 237 1784 1548 Triticeae associated alphaendornavirus isolate Wheeler, complete genome blastn 237 394 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Triticeae associated alphaendornavirus
14443471 14443471 PRJNA404067_P_NODE_22892_length_228_cov_1.640719_g22505_i0 PRJNA404067 22892 228 1.640719 3.74083932 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 399 6.299999999999999e-107   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g22505 i0 98.246 1.49122807017544 228 4 100 0 1 228 3550 3323 Malassezia restricta virus MrV40L, complete genome blastn 340 399 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
16992013 16992013 PRJNA404067_P_NODE_21074_length_233_cov_2.930233_g20687_i0 PRJNA404067 21074 233 2.930233 6.82744289 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 414 2.3099999999999998e-111   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g20687 i0 98.712 1.44635193133047 233 3 100 0 1 233 413 181 Malassezia restricta virus MrV40L, complete genome blastn 337 414 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
20816146 20816146 PRJNA404067_P_NODE_20557_length_235_cov_1.183908_g20170_i0 PRJNA404067 20557 235 1.183908 2.7821838 Chrocagost virus 3129398 Viruses Viruses 309 1.13e-79   NTclustered gi|2717317482|gb|PP171846.1| 3129398 g20170 i0 90.87 467.825531914894 230 21 98 0 6 235 5619 5848 MAG: Chrocagost virus isolate CC1A_k141_84256 genomic sequence blastn 109939 309 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagost virus
24640863 24640863 PRJNA404067_P_NODE_17640_length_248_cov_0.823529_g17253_i0 PRJNA404067 17640 248 0.823529 2.04235192 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 414 2.48e-111   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g17253 i0 96.787 1.00403225806452 249 6 100 2 1 248 2081 1834 Malassezia restricta virus MrV40L, complete genome blastn 249 414 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
24641165 24641165 PRJNA404067_P_NODE_34980_length_204_cov_3.482517_g34593_i0 PRJNA404067 34980 204 3.482517 7.10433468 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 372 1.2e-98   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g34593 i0 99.51 2 204 1 100 0 1 204 2969 3172 Malassezia restricta virus MrV40L, complete genome blastn 408 372 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;