contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA404067" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 414401 | 414401 | PRJNA404067_P_NODE_17621_length_248_cov_1.224599_g17234_i0 | PRJNA404067 | 17621 | 248 | 1.224599 | 3.03700552 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 390 | 4.1799999999999996e-104 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g17234 | i0 | 96.596 | 332.665322580645 | 235 | 8 | 95 | 0 | 1 | 235 | 52555 | 52789 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 82501 | 390 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 1689674 | 1689674 | PRJNA404067_P_NODE_39522_length_199_cov_3.014493_g39135_i0 | PRJNA404067 | 39522 | 199 | 3.014493 | 5.99884107 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 324 | 3.31e-84 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g39135 | i0 | 95.98 | 10.1206030150754 | 199 | 8 | 100 | 0 | 1 | 199 | 1314713 | 1314911 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 2014 | 324 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 2356806 | 2356806 | PRJNA404067_P_NODE_31022_length_209_cov_1.493243_g30635_i0 | PRJNA404067 | 31022 | 209 | 1.493243 | 3.12087787 | Fusobacterium | 848 | Bacteria | Bacteria | 370 | 4.45e-98 | NTclustered | gi|2706407748|gb|CP077116.1| | 76857 | g30635 | i0 | 98.565 | 483.923444976077 | 209 | 3 | 100 | 0 | 1 | 209 | 299207 | 298999 | Fusobacterium polymorphum strain KCOM1257 chromosome, complete genome | blastn | 101140 | 370 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 6184357 | 6184357 | PRJNA404067_P_NODE_22805_length_228_cov_4.089820_g22418_i0 | PRJNA404067 | 22805 | 228 | 4.08982 | 9.3247896 | Leptotrichia | 32067 | Bacteria | Bacteria | 387 | 4.91e-103 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g22418 | i0 | 97.368 | 465.026315789474 | 228 | 5 | 100 | 1 | 1 | 228 | 1757310 | 1757084 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 106026 | 390 | 0.992307692307692 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 8067831 | 8067831 | PRJNA404067_P_NODE_22867_length_228_cov_1.910180_g22480_i0 | PRJNA404067 | 22867 | 228 | 1.91018 | 4.3552104 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 422 | 1.34e-113 | NTclustered | gi|2706067283|gb|CP077110.1| | 76857 | g22480 | i0 | 100 | 4 | 228 | 0 | 100 | 0 | 1 | 228 | 1382156 | 1381929 | Fusobacterium polymorphum strain KCOM1278 chromosome, complete genome | blastn | 912 | 422 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 9342649 | 9342649 | PRJNA404067_P_NODE_19328_length_239_cov_1.488764_g18941_i0 | PRJNA404067 | 19328 | 239 | 1.488764 | 3.55814596 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 392 | 1.11e-104 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g18941 | i0 | 96.234 | 1 | 239 | 9 | 100 | 0 | 1 | 239 | 196291 | 196053 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 239 | 392 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 9342829 | 9342829 | PRJNA404067_P_NODE_30748_length_210_cov_0.946309_g30361_i0 | PRJNA404067 | 30748 | 210 | 0.946309 | 1.9872489 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 350 | 5.84e-92 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g30361 | i0 | 96.682 | 276.338095238095 | 211 | 5 | 100 | 2 | 1 | 210 | 53393 | 53184 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 58031 | 350 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 11284803 | 11284803 | PRJNA404067_P_NODE_44869_length_168_cov_7.542056_g44482_i0 | PRJNA404067 | 44869 | 168 | 7.542056 | 12.67065408 | root | 1 | Root_unresolved | Root_unresolved | 300 | 4.56e-77 | NTclustered | gi|1756501895|gb|MN537503.1| | 852 | g44482 | i0 | 98.81 | 100 | 168 | 2 | 100 | 0 | 1 | 168 | 250 | 417 | Fusobacterium perfoetens strain DSM 105865 16S ribosomal RNA gene, partial sequence | blastn | 16800 | 300 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium perfoetens | ||
| 11893656 | 11893656 | PRJNA404067_P_NODE_40590_length_194_cov_4.345865_g40203_i0 | PRJNA404067 | 40590 | 194 | 4.345865 | 8.4309781 | Fusobacterium mortiferum | 850 | Bacteria | Bacteria | 320 | 4.16e-83 | NTclustered | gi|1370540179|gb|CP028102.1| | 469616 | g40203 | i0 | 96.859 | 2.9639175257732 | 191 | 6 | 98 | 0 | 4 | 194 | 156051 | 155861 | Fusobacterium mortiferum ATCC 9817 chromosome, complete genome | blastn | 575 | 320 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium mortiferum | ||
| 13168152 | 13168152 | PRJNA404067_P_NODE_10351_length_339_cov_2.611511_g9966_i0 | PRJNA404067 | 10351 | 339 | 2.611511 | 8.85302229 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 401 | 2.759999999999999e-107 | NTclustered | gi|2850954511|gb|CP173065.1| | 1319815 | g9966 | i0 | 97.845 | 514.743362831858 | 232 | 5 | 100 | 0 | 108 | 339 | 941232 | 941001 | Cetobacterium somerae ATCC BAA-474 chromosome | blastn | 174498 | 401 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 16383694 | 16383694 | PRJNA404067_P_NODE_23993_length_225_cov_2.932927_g23606_i0 | PRJNA404067 | 23993 | 225 | 2.932927 | 6.59908575 | Fusobacterium | 848 | Bacteria | Bacteria | 411 | 2.869999999999999e-110 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g23606 | i0 | 99.556 | 486.853333333333 | 225 | 1 | 100 | 0 | 1 | 225 | 463043 | 462819 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 109542 | 411 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 16991963 | 16991963 | PRJNA404067_P_NODE_17454_length_249_cov_1.553191_g17067_i0 | PRJNA404067 | 17454 | 249 | 1.553191 | 3.86744559 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 438 | 1.4799999999999996e-118 | NTclustered | gi|2706071841|gb|CP077111.1| | 76857 | g17067 | i0 | 98.4 | 427.987951807229 | 250 | 2 | 100 | 2 | 1 | 249 | 165281 | 165033 | Fusobacterium polymorphum strain KCOM1275 chromosome, complete genome | blastn | 106569 | 438 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 18932632 | 18932632 | PRJNA404067_P_NODE_12015_length_304_cov_3.074074_g11629_i0 | PRJNA404067 | 12015 | 304 | 3.074074 | 9.34518496 | Fusobacterium | 848 | Bacteria | Bacteria | 562 | 1.06e-155 | NTclustered | gi|2446175567|gb|CP117964.1| | 851 | g11629 | i0 | 100 | 490.542763157895 | 304 | 0 | 100 | 0 | 1 | 304 | 2087394 | 2087697 | Fusobacterium nucleatum strain 2/1/50A chromosome, complete genome | blastn | 149125 | 562 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 19540181 | 19540181 | PRJNA404067_P_NODE_12156_length_302_cov_1.746888_g11770_i0 | PRJNA404067 | 12156 | 302 | 1.746888 | 5.27560176 | Leptotrichia sp. oral taxon 225 | 671213 | Bacteria | Bacteria | 553 | 6.32e-153 | NTclustered | gi|257480633|gb|GQ422732.1| | 671213 | g11770 | i0 | 99.669 | 113.278145695364 | 302 | 1 | 100 | 0 | 1 | 302 | 304 | 3 | Leptotrichia sp. oral taxon 225 clone HE052 16S ribosomal RNA gene, partial sequence | blastn | 34210 | 553 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 225 | ||
| 19540334 | 19540334 | PRJNA404067_P_NODE_23456_length_227_cov_1.174699_g23069_i0 | PRJNA404067 | 23456 | 227 | 1.174699 | 2.66656673 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 409 | 1.04e-109 | NTclustered | gi|2706426664|gb|CP077146.1| | 76857 | g23069 | i0 | 99.119 | 99.726872246696 | 227 | 2 | 100 | 0 | 1 | 227 | 1503085 | 1503311 | Fusobacterium polymorphum strain KCOM2500 chromosome, complete genome | blastn | 22638 | 409 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;