RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA401346" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA401346 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5517955 5517955 PRJNA401346_P_NODE_3105_length_292_cov_4.484848_g3084_i0 PRJNA401346 3105 292 4.484848 13.09575616 Phycomyces blakesleeanus 4837 Fungi Fungi 117 9.46e-22   NTclustered gi|1069960134|ref|XM_018440121.1| 763407 g3084 i0 82.014 1.71917808219178 139 23 47 2 105 242 212 75 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 502 117 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
5518122 5518122 PRJNA401346_P_NODE_7965_length_204_cov_0.895105_g7944_i0 PRJNA401346 7965 204 0.895105 1.8260142 Lichtheimia ornata 688661 Fungi Fungi 119 1.73e-22   NTclustered gi|2553565041|ref|XM_058483934.1| 688661 g7944 i0 84.298 6.51960784313725 121 19 59 0 2 122 502 622 Lichtheimia ornata uncharacterized protein (O0I10_003868), partial mRNA blastn 1330 119 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
15716887 15716887 PRJNA401346_P_NODE_2393_length_325_cov_0.954545_g2372_i0 PRJNA401346 2393 325 0.954545 3.10227125 Mucor velutinosus 708070 Fungi Fungi 200 1.03e-46   NTclustered gi|2724955499|ref|XM_064827382.1| 708070 g2372 i0 84.211 60.5261538461538 209 30 64 3 10 216 262 55 Mucor velutinosus uncharacterized protein (ATC70_008128), partial mRNA blastn 19671 200 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;