contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA401346" and tax_phylum = "Bacteroidota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2356514 | 2356514 | PRJNA401346_P_NODE_1862_length_359_cov_1.738255_g1841_i0 | PRJNA401346 | 1862 | 359 | 1.738255 | 6.24033545 | Fluviicola | 332102 | Bacteria | Bacteria | 562 | 1.27e-155 | NTclustered | gi|470488043|ref|NR_076848.1| | 191579 | g1841 | i0 | 94.986 | 256.729805013928 | 359 | 16 | 100 | 2 | 1 | 359 | 707 | 351 | Fluviicola taffensis strain RW262 23S ribosomal RNA gene, complete sequence | blastn | 92166 | 562 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Fluviicola | Fluviicola taffensis | |
| 5518037 | 5518037 | PRJNA401346_P_NODE_565_length_614_cov_2.144665_g544_i0 | PRJNA401346 | 565 | 614 | 2.144665 | 13.1682431 | Aquirufa lenticrescens | 2696560 | Bacteria | Bacteria | 800 | 0 | NTclustered | gi|2091518249|gb|CP049834.1| | 2696560 | g544 | i0 | 91.122 | 482.92345276873 | 597 | 44 | 99 | 6 | 21 | 614 | 217657 | 217067 | Aquirufa lenticrescens strain 9H-EGSE chromosome, complete genome | blastn | 296515 | 800 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa lenticrescens | |
| 8733929 | 8733929 | PRJNA401346_P_NODE_947_length_478_cov_1.683453_g926_i0 | PRJNA401346 | 947 | 478 | 1.683453 | 8.04690534 | Flavobacterium | 237 | Bacteria | Bacteria | 822 | 0 | NTclustered | gi|2279330881|gb|CP101751.1| | 2502784 | g926 | i0 | 97.704 | 465.445606694561 | 479 | 10 | 100 | 1 | 1 | 478 | 718257 | 717779 | Flavobacterium cerinum strain C1 chromosome, complete genome | blastn | 222483 | 822 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium cerinum | |
| 10009161 | 10009161 | PRJNA401346_P_NODE_108_length_1266_cov_1.982573_g100_i0 | PRJNA401346 | 108 | 1266 | 1.982573 | 25.09937418 | Fluviicola | 332102 | Bacteria | Bacteria | 1720 | 0 | NTclustered | gi|470488043|ref|NR_076848.1| | 191579 | g100 | i0 | 91.287 | 409.650078988942 | 1274 | 92 | 100 | 14 | 1 | 1266 | 519 | 1781 | Fluviicola taffensis strain RW262 23S ribosomal RNA gene, complete sequence | blastn | 518617 | 1720 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Fluviicola | Fluviicola taffensis | |
| 10618141 | 10618141 | PRJNA401346_P_NODE_3849_length_269_cov_0.923077_g3828_i0 | PRJNA401346 | 3849 | 269 | 0.923077 | 2.48307713 | Candidatus Pedobacter colombiensis | 3121371 | Bacteria | Bacteria | 460 | 3.45e-125 | NTclustered | gi|2457514890|gb|CP119313.1| | 3121371 | g3828 | i0 | 99.219 | 328.657992565056 | 256 | 1 | 95 | 1 | 15 | 269 | 5517 | 5262 | MAG: Candidatus Pedobacter colombiensis isolate MAG_3858 chromosome, complete genome | blastn | 88409 | 460 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Candidatus Pedobacter colombiensis | |
| 12559766 | 12559766 | PRJNA401346_P_NODE_110_length_1265_cov_1.891196_g100_i1 | PRJNA401346 | 110 | 1265 | 1.891196 | 23.9236294 | Fluviicola | 332102 | Bacteria | Bacteria | 1775 | 0 | NTclustered | gi|470488043|ref|NR_076848.1| | 191579 | g100 | i1 | 92.072 | 437.321739130435 | 1274 | 81 | 100 | 15 | 1 | 1265 | 519 | 1781 | Fluviicola taffensis strain RW262 23S ribosomal RNA gene, complete sequence | blastn | 553212 | 1775 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Fluviicola | Fluviicola taffensis | |
| 13167983 | 13167983 | PRJNA401346_P_NODE_3591_length_276_cov_0.944186_g3570_i0 | PRJNA401346 | 3591 | 276 | 0.944186 | 2.60595336 | Candidatus Fluviicola riflensis | 1798018 | Bacteria | Bacteria | 396 | 1.02e-105 | NTclustered | gi|1229046090|gb|CP022585.1| | 1798018 | g3570 | i0 | 92.701 | 545.539855072464 | 274 | 20 | 99 | 0 | 1 | 274 | 786304 | 786577 | Candidatus Fluviicola riflensis chromosome, complete genome | blastn | 150569 | 396 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Fluviicola | Candidatus Fluviicola riflensis | |
| 16383484 | 16383484 | PRJNA401346_P_NODE_1533_length_390_cov_1.167173_g1512_i0 | PRJNA401346 | 1533 | 390 | 1.167173 | 4.5519747 | Weeksellaceae | 2762318 | Bacteria | Bacteria | 686 | 0 | NTclustered | gi|1527207946|gb|CP034157.1| | 237258 | g1512 | i0 | 98.705 | 483.320512820513 | 386 | 5 | 99 | 0 | 1 | 386 | 2158283 | 2158668 | Cloacibacterium normanense strain NRS-1 chromosome, complete genome | blastn | 188495 | 691 | 0.992764109985528 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Cloacibacterium | Cloacibacterium normanense | |
| 16991882 | 16991882 | PRJNA401346_P_NODE_8694_length_201_cov_0.914286_g8673_i0 | PRJNA401346 | 8694 | 201 | 0.914286 | 1.83771486 | Pedobacter heparinus | 984 | Bacteria | Bacteria | 171 | 4.6299999999999996e-38 | NTclustered | gi|255342900|gb|CP001681.1| | 485917 | g8673 | i0 | 86.164 | 0.791044776119403 | 159 | 20 | 79 | 2 | 44 | 201 | 1724739 | 1724896 | Pedobacter heparinus DSM 2366, complete genome | blastn | 159 | 171 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter heparinus | |
| 18265805 | 18265805 | PRJNA401346_P_NODE_2035_length_347_cov_1.951049_g2014_i0 | PRJNA401346 | 2035 | 347 | 1.951049 | 6.77014003 | Flavobacterium sp. N1994 | 2986827 | Bacteria | Bacteria | 531 | 3.4599999999999992e-146 | NTclustered | gi|2324023692|gb|CP109999.1| | 2986827 | g2014 | i0 | 94.236 | 716.780979827089 | 347 | 20 | 100 | 0 | 1 | 347 | 903425 | 903771 | Flavobacterium sp. N1994 chromosome, complete genome | blastn | 248723 | 531 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. N1994 | |
| 18265956 | 18265956 | PRJNA401346_P_NODE_755_length_530_cov_1.371002_g734_i0 | PRJNA401346 | 755 | 530 | 1.371002 | 7.2663106 | Aquirufa nivalisilvae | 2516557 | Bacteria | Bacteria | 610 | 6.84e-170 | NTclustered | gi|1390254249|gb|CP029346.1| | 2516557 | g734 | i0 | 88.583 | 251.309433962264 | 508 | 51 | 95 | 7 | 1 | 504 | 359553 | 359049 | Aquirufa nivalisilvae strain HME7025 chromosome, complete genome | blastn | 133194 | 610 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa nivalisilvae | |
| 19540107 | 19540107 | PRJNA401346_P_NODE_7596_length_205_cov_0.888889_g7575_i0 | PRJNA401346 | 7596 | 205 | 0.888889 | 1.82222245 | Chryseobacterium gambrini | 373672 | Bacteria | Bacteria | 379 | 7.229999999999999e-101 | NTclustered | gi|2429070341|gb|CP115857.1| | 373672 | g7575 | i0 | 100 | 94.8731707317073 | 205 | 0 | 100 | 0 | 1 | 205 | 526531 | 526327 | Chryseobacterium gambrini strain PL22-1A chromosome, complete genome | blastn | 19449 | 379 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium gambrini | |
| 22758034 | 22758034 | PRJNA401346_P_NODE_2738_length_307_cov_1.308943_g2717_i0 | PRJNA401346 | 2738 | 307 | 1.308943 | 4.01845501 | Fluviicola | 332102 | Bacteria | Bacteria | 534 | 2.33e-147 | NTclustered | gi|470488043|ref|NR_076848.1| | 191579 | g2717 | i0 | 98.046 | 268.918566775244 | 307 | 6 | 100 | 0 | 1 | 307 | 2461 | 2155 | Fluviicola taffensis strain RW262 23S ribosomal RNA gene, complete sequence | blastn | 82558 | 534 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Fluviicola | Fluviicola taffensis | |
| 23366229 | 23366229 | PRJNA401346_P_NODE_1219_length_429_cov_1.437500_g1198_i0 | PRJNA401346 | 1219 | 429 | 1.4375 | 6.166875 | Flavobacterium channae | 2897181 | Bacteria | Bacteria | 344 | 6.1e-90 | NTclustered | gi|2164478757|gb|CP089096.1| | 2897181 | g1198 | i0 | 88.055 | 362.21678321678303 | 293 | 32 | 68 | 3 | 103 | 393 | 486073 | 485782 | Flavobacterium channae strain KSM-R2A30 chromosome, complete genome | blastn | 155391 | 344 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium channae | |
| 23366236 | 23366236 | PRJNA401346_P_NODE_1399_length_403_cov_1.061404_g1378_i0 | PRJNA401346 | 1399 | 403 | 1.061404 | 4.27745812 | Pedobacter sp. KACC 23697 | 3149230 | Bacteria | Bacteria | 617 | 3.0399999999999997e-172 | NTclustered | gi|2739540447|gb|CP157485.1| | 3149230 | g1378 | i0 | 95.385 | 376.54094292804 | 390 | 14 | 100 | 4 | 16 | 403 | 13949 | 13562 | Pedobacter sp. KACC 23697 chromosome, complete genome | blastn | 151746 | 617 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter sp. KACC 23697 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;