contig_metadata
6 rows where analysis = "blastn", bioproject = "PRJNA401346" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2356526 | 2356526 | PRJNA401346_P_NODE_5962_length_215_cov_1.084416_g5941_i0 | PRJNA401346 | 5962 | 215 | 1.084416 | 2.3314944 | Staphylococcus | 1279 | Bacteria | Bacteria | 375 | 9.899999999999998e-100 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g5941 | i0 | 98.14 | 538.413953488372 | 215 | 4 | 100 | 0 | 1 | 215 | 748752 | 748538 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 115759 | 375 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 6792030 | 6792030 | PRJNA401346_P_NODE_6806_length_207_cov_1.746575_g6785_i0 | PRJNA401346 | 6806 | 207 | 1.746575 | 3.61541025 | Staphylococcus pasteuri | 45972 | Bacteria | Bacteria | 383 | 5.65e-102 | NTclustered | gi|1250045397|gb|CP017463.1| | 45972 | g6785 | i0 | 100 | 20.4154589371981 | 207 | 0 | 100 | 0 | 1 | 207 | 469796 | 470002 | Staphylococcus pasteuri strain JS7 chromosome, complete genome | blastn | 4226 | 383 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus pasteuri | ||
| 12559780 | 12559780 | PRJNA401346_P_NODE_8650_length_201_cov_0.914286_g8629_i0 | PRJNA401346 | 8650 | 201 | 0.914286 | 1.83771486 | Finegoldia | 150022 | Bacteria | Bacteria | 372 | 1.18e-98 | NTclustered | gi|2127562652|gb|CP085955.1| | 1260 | g8629 | i0 | 100 | 7.52238805970149 | 201 | 0 | 100 | 0 | 1 | 201 | 578326 | 578526 | Finegoldia magna strain FDAARGOS_1557 chromosome, complete genome | blastn | 1512 | 372 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 13834584 | 13834584 | PRJNA401346_P_NODE_3631_length_274_cov_1.948357_g3610_i0 | PRJNA401346 | 3631 | 274 | 1.948357 | 5.33849818 | Exiguobacterium | 33986 | Bacteria | Bacteria | 499 | 7.48e-137 | NTclustered | gi|2452055134|gb|CP109617.1| | 307643 | g3610 | i0 | 99.635 | 826.091240875912 | 274 | 0 | 100 | 1 | 1 | 274 | 40983 | 40711 | Exiguobacterium profundum strain TSS-3 chromosome, complete genome | blastn | 226349 | 499 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium profundum | |||
| 15717018 | 15717018 | PRJNA401346_P_NODE_7153_length_206_cov_0.882759_g7132_i0 | PRJNA401346 | 7153 | 206 | 0.882759 | 1.81848354 | Staphylococcus pettenkoferi | 170573 | Bacteria | Bacteria | 359 | 9.47e-95 | NTclustered | gi|1352851708|gb|CP022096.2| | 170573 | g7132 | i0 | 98.058 | 5.36407766990291 | 206 | 4 | 100 | 0 | 1 | 206 | 1990918 | 1991123 | Staphylococcus pettenkoferi strain FDAARGOS_288 chromosome, complete genome | blastn | 1105 | 359 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus pettenkoferi | ||
| 25307249 | 25307249 | PRJNA401346_P_NODE_8720_length_201_cov_0.914286_g8699_i0 | PRJNA401346 | 8720 | 201 | 0.914286 | 1.83771486 | Staphylococcus | 1279 | Bacteria | Bacteria | 359 | 9.2e-95 | NTclustered | gi|2006240191|gb|CP071508.1| | 1283 | g8699 | i0 | 99 | 51.636815920398 | 200 | 2 | 99 | 0 | 2 | 201 | 1894593 | 1894792 | Staphylococcus haemolyticus strain 7b chromosome, complete genome | blastn | 10379 | 359 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;