RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA401346" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 4 ✖

bioproject 1

  • PRJNA401346 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8067473 8067473 PRJNA401346_P_NODE_1707_length_373_cov_1.230769_g1686_i0 PRJNA401346 1707 373 1.230769 4.59076837 Genomoviridae sp. 2202565 Viruses Viruses 379 1.43e-100   NTclustered gi|1832329329|gb|MT309858.1| 2202565 g1686 i0 85.638 3.35120643431635 376 36 100 11 1 373 727 1087 MAG: Genomoviridae sp. isolate 6434_413, complete genome blastn 1250 379 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
8067483 8067483 PRJNA401346_P_NODE_2127_length_342_cov_0.811388_g2106_i0 PRJNA401346 2127 342 0.811388 2.77494696 Genomoviridae sp. 2202565 Viruses Viruses 322 2.23e-83   NTclustered gi|1832329329|gb|MT309858.1| 2202565 g2106 i0 83.929 1.94152046783626 336 54 98 0 7 342 407 72 MAG: Genomoviridae sp. isolate 6434_413, complete genome blastn 664 322 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
22090701 22090701 PRJNA401346_P_NODE_458_length_679_cov_1.058252_g439_i0 PRJNA401346 458 679 1.058252 7.18553108 Genomoviridae sp. 2202565 Viruses Viruses 1053 0   NTclustered gi|1832329329|gb|MT309858.1| 2202565 g439 i0 94.868 22.3740795287187 682 22 99 2 1 669 1124 1805 MAG: Genomoviridae sp. isolate 6434_413, complete genome blastn 15192 1053 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
22090800 22090800 PRJNA401346_P_NODE_7718_length_204_cov_1.244755_g7697_i0 PRJNA401346 7718 204 1.244755 2.5393002 Cressdnaviricota sp. 2748378 Viruses Viruses 219 1.66e-52   NTclustered gi|2896100955|gb|PQ792342.1| 2748378 g7697 i0 98.4 0.985294117647059 125 0 75 1 31 153 2 126 MAG: Cressdnaviricota sp. isolate SbovineF090_cress11 genomic sequence blastn 201 219 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;