RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA401346" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 1 ✖

bioproject 1

  • PRJNA401346 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5518030 5518030 PRJNA401346_P_NODE_5385_length_229_cov_1.142857_g5364_i0 PRJNA401346 5385 229 1.142857 2.61714253 Retroviridae sp. 2681591 Viruses Viruses 161 3.25e-35   NTclustered gi|2896100155|gb|PQ791973.1| 2681591 g5364 i0 95.96 0.432314410480349 99 4 43 0 131 229 4282 4184 MAG: Retroviridae sp. isolate Hpika254_retro1 genomic sequence blastn 99 161 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Retroviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;