contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA401346" and tax_kingdom = "Bacillati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1689179 | 1689179 | PRJNA401346_P_NODE_8082_length_203_cov_0.901408_g8061_i0 | PRJNA401346 | 8082 | 203 | 0.901408 | 1.82985824 | uncultured Solirubrobacterales bacterium | 768556 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|2874253801|emb|OY969785.1| | 768556 | g8061 | i0 | 100 | 0.142857142857143 | 29 | 0 | 14 | 0 | 150 | 178 | 3218967 | 3218995 | MAG: uncultured Solirubrobacterales bacterium isolate MFD09603.bin.c.7 genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | uncultured Solirubrobacterales bacterium | ||||
| 2356526 | 2356526 | PRJNA401346_P_NODE_5962_length_215_cov_1.084416_g5941_i0 | PRJNA401346 | 5962 | 215 | 1.084416 | 2.3314944 | Staphylococcus | 1279 | Bacteria | Bacteria | 375 | 9.899999999999998e-100 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g5941 | i0 | 98.14 | 538.413953488372 | 215 | 4 | 100 | 0 | 1 | 215 | 748752 | 748538 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 115759 | 375 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 3631924 | 3631924 | PRJNA401346_P_NODE_4463_length_252_cov_1.005236_g4442_i0 | PRJNA401346 | 4463 | 252 | 1.005236 | 2.53319472 | Cutibacterium | 1912216 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g4442 | i0 | 100 | 64.2142857142857 | 252 | 0 | 100 | 0 | 1 | 252 | 438215 | 438466 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 16182 | 466 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 4909076 | 4909076 | PRJNA401346_P_NODE_1224_length_428_cov_1.700272_g1203_i0 | PRJNA401346 | 1224 | 428 | 1.700272 | 7.27716416 | Cutibacterium | 1912216 | Bacteria | Bacteria | 769 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g1203 | i0 | 99.065 | 272.544392523364 | 428 | 4 | 100 | 0 | 1 | 428 | 56167 | 56594 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 116649 | 769 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 6792030 | 6792030 | PRJNA401346_P_NODE_6806_length_207_cov_1.746575_g6785_i0 | PRJNA401346 | 6806 | 207 | 1.746575 | 3.61541025 | Staphylococcus pasteuri | 45972 | Bacteria | Bacteria | 383 | 5.65e-102 | NTclustered | gi|1250045397|gb|CP017463.1| | 45972 | g6785 | i0 | 100 | 20.4154589371981 | 207 | 0 | 100 | 0 | 1 | 207 | 469796 | 470002 | Staphylococcus pasteuri strain JS7 chromosome, complete genome | blastn | 4226 | 383 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus pasteuri | ||
| 8067549 | 8067549 | PRJNA401346_P_NODE_4827_length_242_cov_1.232044_g4806_i0 | PRJNA401346 | 4827 | 242 | 1.232044 | 2.98154648 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 359 | 1.15e-94 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g4806 | i0 | 95.154 | 287.838842975207 | 227 | 11 | 94 | 0 | 1 | 227 | 552164 | 551938 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 69657 | 359 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 8733927 | 8733927 | PRJNA401346_P_NODE_8307_length_202_cov_1.758865_g8286_i0 | PRJNA401346 | 8307 | 202 | 1.758865 | 3.5529073 | Cutibacterium | 1912216 | Bacteria | Bacteria | 374 | 3.3e-99 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g8286 | i0 | 100 | 52.990099009901 | 202 | 0 | 100 | 0 | 1 | 202 | 2509077 | 2509278 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 10704 | 374 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 12559780 | 12559780 | PRJNA401346_P_NODE_8650_length_201_cov_0.914286_g8629_i0 | PRJNA401346 | 8650 | 201 | 0.914286 | 1.83771486 | Finegoldia | 150022 | Bacteria | Bacteria | 372 | 1.18e-98 | NTclustered | gi|2127562652|gb|CP085955.1| | 1260 | g8629 | i0 | 100 | 7.52238805970149 | 201 | 0 | 100 | 0 | 1 | 201 | 578326 | 578526 | Finegoldia magna strain FDAARGOS_1557 chromosome, complete genome | blastn | 1512 | 372 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 13834584 | 13834584 | PRJNA401346_P_NODE_3631_length_274_cov_1.948357_g3610_i0 | PRJNA401346 | 3631 | 274 | 1.948357 | 5.33849818 | Exiguobacterium | 33986 | Bacteria | Bacteria | 499 | 7.48e-137 | NTclustered | gi|2452055134|gb|CP109617.1| | 307643 | g3610 | i0 | 99.635 | 826.091240875912 | 274 | 0 | 100 | 1 | 1 | 274 | 40983 | 40711 | Exiguobacterium profundum strain TSS-3 chromosome, complete genome | blastn | 226349 | 499 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium profundum | |||
| 15108851 | 15108851 | PRJNA401346_P_NODE_3172_length_290_cov_1.266376_g3151_i0 | PRJNA401346 | 3172 | 290 | 1.266376 | 3.6724904 | Actinomycetota | 201174 | Bacteria | Bacteria | 93.5 | 1.58e-14 | NTclustered | gi|2874253729|emb|OY969571.1| | 152507 | g3151 | i0 | 96.429 | 19.3862068965517 | 56 | 2 | 19 | 0 | 6 | 61 | 320267 | 320212 | MAG: uncultured Actinomycetes bacterium isolate MFD09267.bin.1.216 genome assembly, chromosome: 1 | blastn | 5622 | 93.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | uncultured Actinomycetes bacterium | |||||
| 15717018 | 15717018 | PRJNA401346_P_NODE_7153_length_206_cov_0.882759_g7132_i0 | PRJNA401346 | 7153 | 206 | 0.882759 | 1.81848354 | Staphylococcus pettenkoferi | 170573 | Bacteria | Bacteria | 359 | 9.47e-95 | NTclustered | gi|1352851708|gb|CP022096.2| | 170573 | g7132 | i0 | 98.058 | 5.36407766990291 | 206 | 4 | 100 | 0 | 1 | 206 | 1990918 | 1991123 | Staphylococcus pettenkoferi strain FDAARGOS_288 chromosome, complete genome | blastn | 1105 | 359 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus pettenkoferi | ||
| 18932585 | 18932585 | PRJNA401346_P_NODE_315_length_814_cov_1.560425_g301_i0 | PRJNA401346 | 315 | 814 | 1.560425 | 12.7018595 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1504 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g301 | i0 | 100 | 277.69656019656 | 814 | 0 | 100 | 0 | 1 | 814 | 55365 | 56178 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 226045 | 1504 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22758036 | 22758036 | PRJNA401346_P_NODE_4078_length_263_cov_0.910891_g4057_i0 | PRJNA401346 | 4078 | 263 | 0.910891 | 2.39564333 | Microbacterium | 33882 | Bacteria | Bacteria | 436 | 5.67e-118 | NTclustered | gi|1916862553|gb|MW115344.1| | 51671 | g4057 | i0 | 96.578 | 100.007604562738 | 263 | 9 | 100 | 0 | 1 | 263 | 708 | 446 | Microbacterium sp. strain CPBF 1240 16S ribosomal RNA gene, partial sequence | blastn | 26302 | 436 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium sp. | ||
| 22758045 | 22758045 | PRJNA401346_P_NODE_6198_length_209_cov_1.297297_g6177_i0 | PRJNA401346 | 6198 | 209 | 1.297297 | 2.71135073 | Mycobacterium | 1763 | Bacteria | Bacteria | 381 | 2.0599999999999996e-101 | NTclustered | gi|2872563150|gb|CP176427.1| | 3385967 | g6177 | i0 | 99.522 | 162.531100478469 | 209 | 1 | 100 | 0 | 1 | 209 | 1409123 | 1409331 | Mycobacterium sp. SMC-16 chromosome, complete genome | blastn | 33969 | 381 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium sp. SMC-16 | ||
| 25307249 | 25307249 | PRJNA401346_P_NODE_8720_length_201_cov_0.914286_g8699_i0 | PRJNA401346 | 8720 | 201 | 0.914286 | 1.83771486 | Staphylococcus | 1279 | Bacteria | Bacteria | 359 | 9.2e-95 | NTclustered | gi|2006240191|gb|CP071508.1| | 1283 | g8699 | i0 | 99 | 51.636815920398 | 200 | 2 | 99 | 0 | 2 | 201 | 1894593 | 1894792 | Staphylococcus haemolyticus strain 7b chromosome, complete genome | blastn | 10379 | 359 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;