RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA401346" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA401346 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1689083 1689083 PRJNA401346_P_NODE_5102_length_236_cov_1.148571_g5081_i0 PRJNA401346 5102 236 1.148571 2.71062756 Neobodo designis 312471 Euglenozoa other_Eukaryota 425 1.08e-114   NTclustered gi|1476664123|gb|MH917128.1| 312471 g5081 i0 99.153 99.6694915254237 236 2 100 0 1 236 363 598 Neobodo designis isolate M1-19 small subunit ribosomal RNA gene, partial sequence blastn 23522 425 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
3631925 3631925 PRJNA401346_P_NODE_5783_length_219_cov_1.392405_g5762_i0 PRJNA401346 5783 219 1.392405 3.04936695 Leishmania 5658 Euglenozoa other_Eukaryota 206 1.41e-48   NTclustered gi|2593260741|emb|OY748518.1| 5660 g5762 i0 85.641 26.5296803652968 195 28 89 0 25 219 181312 181118 Leishmania braziliensis isolate MHOM/BR/75/M2903 genome assembly, chromosome: 32 blastn 5810 206 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
4241357 4241357 PRJNA401346_P_NODE_5744_length_220_cov_1.207547_g5723_i0 PRJNA401346 5744 220 1.207547 2.6566034 Acrasis rosea 43695 Heterolobosea other_Eukaryota 254 4.98e-63   NTclustered gi|12083876|gb|AF190771.1|AF190771 43695 g5723 i0 92.655 67.3181818181818 177 12 80 1 45 220 433 257 Acrasis rosea elongation factor 1 alpha (tef1) gene, partial cds blastn 14810 254 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis rosea
6791911 6791911 PRJNA401346_P_NODE_2526_length_317_cov_1.105469_g2505_i0 PRJNA401346 2526 317 1.105469 3.50433673 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 346 1.22e-90   NTclustered gi|1673142105|ref|XM_029373822.1| 83891 g2505 i0 90.494 22.9369085173502 263 23 83 2 56 317 61 322 Trypanosoma conorhini uncharacterized protein (Tco025E_06955), partial mRNA blastn 7271 346 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
9342473 9342473 PRJNA401346_P_NODE_6448_length_209_cov_0.864865_g6427_i0 PRJNA401346 6448 209 0.864865 1.80756785 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 318 1.64e-82   NTclustered gi|91983198|gb|DQ450539.1| 71804 g6427 i0 94.231 145.043062200957 208 12 99 0 1 208 1048 841 Trypanosoma grayi beta tubulin gene, partial cds; alpha tubulin gene, complete cds; and beta tubulin gene, partial cds blastn 30314 318 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
11893014 11893014 PRJNA401346_P_NODE_3390_length_283_cov_0.797297_g3369_i0 PRJNA401346 3390 283 0.797297 2.25635051 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 451 2.1999999999999995e-122   NTclustered gi|290985679|ref|XM_002675507.1| 5762 g3369 i0 95.423 1.00353356890459 284 12 100 1 1 283 1167 884 Naegleria gruberi methionyl aminopeptidase (NAEGRDRAFT_58459), mRNA blastn 284 451 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15716907 15716907 PRJNA401346_P_NODE_3113_length_292_cov_1.385281_g3092_i0 PRJNA401346 3113 292 1.385281 4.04502052 Porcisia hertigi 2761500 Euglenozoa other_Eukaryota 198 3.28e-46   NTclustered gi|2794848421|ref|XM_067897202.1| 2761500 g3092 i0 80.534 12.8321917808219 262 47 89 4 1 260 202 461 Porcisia hertigi uncharacterized protein (JKF63_01154), partial mRNA blastn 3747 198 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Porcisia Porcisia hertigi
20815944 20815944 PRJNA401346_P_NODE_6537_length_208_cov_0.870748_g6516_i0 PRJNA401346 6537 208 0.870748 1.81115584 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 353 4.46e-93   NTclustered gi|290988973|ref|XM_002677099.1| 5762 g6516 i0 97.573 19.3317307692308 206 5 99 0 1 206 208 413 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55776), mRNA blastn 4021 353 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23366435 23366435 PRJNA401346_P_NODE_8499_length_202_cov_0.907801_g8478_i0 PRJNA401346 8499 202 0.907801 1.83375802 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 141 3.65e-29   NTclustered gi|2119426811|ref|XM_044701171.1| 5763 g8478 i0 80.319 6.45544554455446 188 35 93 2 3 189 391 205 Naegleria fowleri uncharacterized protein (FDP41_010830), partial mRNA blastn 1304 141 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
24640592 24640592 PRJNA401346_P_NODE_3520_length_278_cov_1.216590_g3499_i0 PRJNA401346 3520 278 1.21659 3.3821202 Percolomonas cosmopolitus 63605 Heterolobosea other_Eukaryota 370 6.219999999999999e-98   NTclustered gi|33089879|gb|AY283748.1| 63605 g3499 i0 92.337 99.2230215827338 261 18 94 2 19 278 1 260 Percolomonas cosmopolitus isolate Gym67_1 actin gene, partial cds blastn 27584 370 1 Eukaryota Discoba   Heterolobosea     Percolomonadidae Percolomonas Percolomonas cosmopolitus
24640672 24640672 PRJNA401346_P_NODE_6000_length_214_cov_1.254902_g5979_i0 PRJNA401346 6000 214 1.254902 2.68549028 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 209 1.06e-49   NTclustered gi|686640876|ref|XM_009314609.1| 71804 g5979 i0 85.5 7.02336448598131 200 29 93 0 12 211 307 506 Trypanosoma grayi 40S ribosomal protein SA partial mRNA blastn 1503 209 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
25307241 25307241 PRJNA401346_P_NODE_4760_length_244_cov_1.005464_g4739_i0 PRJNA401346 4760 244 1.005464 2.45333216 Kinetoplastea 5653 Euglenozoa other_Eukaryota 217 7.38e-52   NTclustered gi|959455905|gb|KT588836.1| 35226 g4739 i0 86.07 72.7950819672131 201 28 82 0 44 244 1065 865 Dimastigella trypaniformis culture ATCC:50263 glyceraldehyde 3-phosphate dehydrogenase mRNA, partial cds blastn 17762 219 0.990867579908676 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Dimastigella Dimastigella trypaniformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;