RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA400391" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA400391 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6184172 6184172 PRJNA400391_S_NODE_6685_length_150_cov_1.408696_g6624_i0 PRJNA400391 6685 150 1.408696 2.113044 Mortierella 4855 Fungi Fungi 84.2 4.33e-12   NTclustered gi|411030762|gb|JX270228.1| 1253901 g6624 i0 89.552 1.78666666666667 67 6 45 1 82 148 110 175 Mortierella sp. 08CT03 28S-18S ribosomal RNA intergenic spacer, partial sequence blastn 268 84.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella sp. 08CT03
11284373 11284373 PRJNA400391_S_NODE_829_length_377_cov_4.301170_g768_i0 PRJNA400391 829 377 4.30117 16.2154109 Gigasporaceae 36753 Fungi Fungi 121 9.7e-23   NTclustered gi|658131649|emb|HF968975.1| 4874 g768 i0 86.607 12.1564986737401 112 12 29 3 206 316 1903 2012 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 3, clone BL2_4_2 blastn 4583 121 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
13167895 13167895 PRJNA400391_S_NODE_5911_length_161_cov_3.555556_g5850_i0 PRJNA400391 5911 161 3.555556 5.72444516 uncultured Glomeromycotina 241622 Fungi Fungi 147 5.959999999999999e-31   NTclustered gi|1569056356|gb|MG664375.1| 241622 g5850 i0 84.211 94.1180124223603 152 22 93 2 8 157 945 1096 Uncultured Glomeromycotina clone G40123 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15153 147 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina
14443017 14443017 PRJNA400391_S_NODE_392_length_481_cov_15.843049_g333_i0 PRJNA400391 392 481 15.843049 76.20506569 Diversispora versiformis 1963269 Fungi Fungi 108 9.86e-19   NTclustered gi|56791308|gb|AY842573.1| 1963269 g333 i0 86.735 4.01455301455301 98 11 20 2 81 177 368 272 Glomus versiforme clone LSU1 large subunit ribosomal RNA gene, partial sequence blastn 1931 108 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Diversisporaceae Diversispora Diversispora versiformis
18265753 18265753 PRJNA400391_S_NODE_595_length_425_cov_18.630769_g535_i0 PRJNA400391 595 425 18.630769 79.18076825 uncultured Entrophospora 1150877 Fungi Fungi 167 1.4e-36   NTclustered gi|1430413057|gb|MH629305.1| 1150877 g535 i0 89.63 40.1435294117647 135 9 41 4 292 425 497 627 Uncultured Entrophospora clone 2DWRPS1-3 small subunit ribosomal RNA gene, partial sequence blastn 17061 167 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Entrophosporales Entrophosporaceae   uncultured Entrophospora
19539839 19539839 PRJNA400391_S_NODE_3276_length_222_cov_4.823529_g3215_i0 PRJNA400391 3276 222 4.823529 10.70823438 Lichtheimia corymbifera 42458 Fungi Fungi 58.4 4.23e-4   NTclustered gi|225131089|gb|FJ345350.1| 42458 g3215 i0 100 3.67567567567568 31 0 14 0 63 93 2226 2256 Mycocladus corymbiferus strain ATCC 14058 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 816 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
25307168 25307168 PRJNA400391_S_NODE_2140_length_272_cov_43.354430_g2079_i0 PRJNA400391 2140 272 43.35443 117.9240496 Fungi 4751 Fungi Fungi 497 2.67e-136   NTclustered gi|658131632|emb|HF968958.1| 4874 g2079 i0 99.632 141.459558823529 272 1 100 0 1 272 1996 2267 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 38477 497 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;