RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA400391" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA400391 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4909036 4909036 PRJNA400391_S_NODE_3704_length_209_cov_5.183908_g3643_i0 PRJNA400391 3704 209 5.183908 10.83436772 Eukaryota 2759 Fungi Fungi 80.5 8.41e-11   NTclustered gi|82398068|gb|DQ273766.1| 276837 g3643 i0 100 20.4928229665072 43 0 21 0 166 208 2554 2596 Rozella sp. JEL347 isolate AFTOL-ID 16 28S ribosomal RNA gene, partial sequence blastn 4283 80.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp. JEL347
11892858 11892858 PRJNA400391_S_NODE_2650_length_246_cov_2.625592_g2589_i0 PRJNA400391 2650 246 2.625592 6.45895632 Cryptomycota sp. 2012228 Fungi Fungi 279 9.36e-71   NTclustered gi|2468791035|gb|OQ702926.1| 2012228 g2589 i0 87.449 100.857723577236 247 26 100 4 1 246 4113 3871 Cryptomycota sp. isolate PSC258 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24811 279 1 Eukaryota Opisthokonta Fungi Cryptomycota         Cryptomycota sp.
15716798 15716798 PRJNA400391_S_NODE_4513_length_188_cov_3.856209_g4452_i0 PRJNA400391 4513 188 3.856209 7.24967292 Rozella sp. JEL347 276837 Fungi Fungi 174 3.3e-39   NTclustered gi|82398068|gb|DQ273766.1| 276837 g4452 i0 93.22 61.5744680851064 118 8 63 0 1 118 2396 2513 Rozella sp. JEL347 isolate AFTOL-ID 16 28S ribosomal RNA gene, partial sequence blastn 11576 174 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp. JEL347

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;